Return to main results Retrieve Phyre Job Id

Job DescriptionP31453
Confidence69.45%DateThu Jan 5 11:47:45 GMT 2012
Rank302Aligned Residues26
% Identity12%Templatec3mzyA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:rna polymerase sigma-h factor; PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50..
Predicted Secondary structure 




Query SS confidence 

























Query Sequence  GEKKLAEEFAVSRMTIRKAIDLLVAW
Query Conservation 

 


   



 


 

  
   
Alig confidence 

























Template Conservation 
  


  
 

  


  
 


  
Template Sequence  SYREIATILSKNLKSIDNTIQRIRKK
Template Known Secondary structure 
T

Template Predicted Secondary structure 



Template SS confidence 

























   166...170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions