 |
Job Description | P31453 | Confidence | 84.20% | Date | Thu Jan 5 11:47:45 GMT 2012 |
Rank | 245 | Aligned Residues | 37 |
% Identity | 22% | Template | c3majA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna processing chain a; |
PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009
|
Resolution | 2.05 Å |
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | K | K | L | A | E | E | F | A | V | S | R | M | T | I | R | K | A | I | D | L | L | V | A | W | G | L | V | V | R | R | H | G | S | G | T | Y |
Query Conservation |   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
| . |   |   |
|
Template Sequence |   |
G | I | D | D | L | I | R | L | S | G | I | S | P | A | V | V | R | T | I | L | L | E | L | E | L | A | G | R | L | E | R | H | G | G | . |
S | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
| T | T | . | S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
341 | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | |
. | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|