Job Description P31453 Confidence 99.89% Date Thu Jan 5 11:47:45 GMT 2012 Rank 6 Aligned Residues 160 % Identity 15% Template c3f8lC_ PDB info PDB header:transcription Chain: C: PDB Molecule:hth-type transcriptional repressor phnf; PDBTitle: crystal structure of the effector domain of phnf from mycobacterium2 smegmatis Resolution 1.90 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	T	A	S	L	T	G	L	V	E	V	L	K	R	Q	G	K	T	V	T	S	Q	V	L	I	F	E	I	M	P	A	P	P	A	I	A	S	Q	L	R	I	Q	I	N	E	Q	I	Y	F	S	R	R	V	R	F	V	E	G	K	P	L	M	L	E	D	S	Y	M	P	V	K	L	F	R	N	L	S	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	P	L	G	M	G	S	Y	T	E	A	A	K	A	Q	G	L	S	A	G	R	I	L	V	A	W	S	D	L	T	A	D	E	V	L	A	G	V	L	G	V	D	V	G	A	P	V	L	Q	L	E	R	V	L	T	T	D	G	V	R	V	G	L	E	T	T	K	L	P	A	Q	R	Y	P	G	L	R	E	T
Template Known Secondary structure							S	S									T	T																								T			T	T													T	T												G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	E	G	S	K	F	E	Y	I	E	Q	E	C	G	I	L	I	G	G	N	Y	E	S	L	T	P	V	L	A	D	R	L	L	A	R	Q	M	K	V	A	E	H	T	P	L	L	R	I	T	S	L	S	Y	S	E	S	G	E	F	L	N	Y	S	V	M	F	R	N	A	S	E	Y	Q	V	E	Y	H	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	H	E	A	S	L	Y	A	E	I	R	S	R	G	I	A	F	T	R	T	V	D	T	I	D	T	A	L	P	D	A	R	E	A	A	L	L	G	A	D	A	R	T	P	M	F	L	L	N	R	V	S	Y	D	Q	D	D	V	A	I	E	Q	R	R	S	L	Y	R	G	D	R	M	T	F	T	A	V	M	H
Template Known Secondary structure				T	T	S									T	T																								T			T	T	S												T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions