Job Description P31453 Confidence 100.00% Date Thu Jan 5 11:47:45 GMT 2012 Rank 4 Aligned Residues 214 % Identity 25% Template c2wv0H_ PDB info PDB header:transcription Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa; PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	S	I	A	E	R	L	R	I	R	L	N	S	A	D	F	T	L	N	S	L	L	P	G	E	K	K	L	A	E	E	F	A	V	S	R	M	T	I	R	K	A	I	D	L	L	V	A	W	G	L	V	V	R	R	H	G	S	G	T	Y	L	V	R	K	D	V	L	H	Q	T	A	S	L	T	G	L	V
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		I	Y	Y	Q	I	M	E	Q	L	K	T	Q	I	K	N	G	E	L	Q	P	D	M	P	L	P	S	E	R	E	Y	A	.	.	.	.	.	.	.	.	E	Q	R	Q	A	L	S	N	L	V	N	E	G	L	L	Y	R	L	T	F	V	S	K	P	K	M	E	.	.	.	.	Q	A	L	Q	G	L	T	S	F	T
Template Known Secondary structure																	T	S	S		T	T		B									.	.	.	.	.	.	.	.											T	T	T	S													S	.	.	.	.	T	T	T	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	K	R	Q	G	K	T	V	T	S	Q	V	L	I	F	E	I	M	P	A	P	P	A	I	A	S	Q	L	R	I	Q	I	N	E	Q	I	Y	F	S	R	R	V	R	F	V	E	G	K	P	L	M	L	E	D	S	Y	M	P	V	K	L	F	R	N	L	S	L	Q	H	L	E	G	S	K	F	E	Y	I
Query Conservation
Alig confidence																																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		E	D	M	K	S	R	G	M	T	P	G	S	R	L	I	D	Y	Q	L	I	D	S	T	E	E	L	A	A	I	L	S	.	.	.	.	.	.	I	H	K	I	T	R	V	R	L	A	N	D	I	P	M	A	I	E	S	S	H	I	P	F	E	L	A	G	E	L	N	E	S	H	F	Q	S	S	I	Y	D	H	I
Template Known Secondary structure						T	T	T																									.	.	.	.	.	.											T	T																	S			T	T	T	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	C	G	I	L	I	G	G	N	Y	E	S	L	T	P	V	L	A	D	R	L	L	A	R	Q	M	K	V	A	E	H	T	P	L	L	R	I	T	S	L	S	Y	S	E	S	G	E	F	L	N	Y	S	V	M	F	R	N	A	S	E	Y	Q	V	E	Y	H	L	R	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	Y	N	S	I	P	I	S	R	A	K	Q	E	L	E	P	S	A	A	T	T	E	E	A	N	I	L	G	I	Q	K	G	A	P	V	L	L	I	K	R	T	T	Y	L	Q	N	G	T	A	F	E	H	A	K	S	V	Y	R	G	D	R	Y	T	F	V	H	Y	M	D	R	L
Template Known Secondary structure					T																									T	S		T	T													T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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