Job Description P31453 Confidence 56.71% Date Thu Jan 5 11:47:45 GMT 2012 Rank 362 Aligned Residues 37 % Identity 19% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		S	I	A	E	R	L	R	I	R	L	N	S	A	D	F	T	L	N	S	L	L	P	G	E	K	K	L	A	E	E	F	.	.	.	.	.	A	V	S	R	M	T	I	R	K
Query Conservation																																	.	.	.	.	.
Alig confidence																.	.						.										.	.	.	.	.
Template Conservation																.	.						.
Template Sequence		E	L	M	K	L	I	K	E	I	V	E	N	E	D	.	.	K	R	K	P	Y	.	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K
Template Known Secondary structure		T	T									T	T	S		.	.	T	T	S			.													T
Template Predicted Secondary structure																.	.						.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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