Job Description P31453 Confidence 97.28% Date Thu Jan 5 11:47:45 GMT 2012 Rank 46 Aligned Residues 109 % Identity 18% Template c2ewnA_ PDB info PDB header:ligase, transcription Chain: A: PDB Molecule:bira bifunctional protein; PDBTitle: ecoli biotin repressor with co-repressor analog Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		I	A	E	R	L	R	I	R	L	N	S	A	D	F	T	L	N	S	L	L	P	G	E	K	K	L	A	E	E	F	A	V	S	R	M	T	I	R	K	A	I	D	L	L	V	A	W	G	L	V	V	.	R	R	H	G	S	G	T	Y	L	V	R	K	D	V	L	H	Q	T	A	S	L	T	G	L	V	E	V	L
Query Conservation																																																					.
Alig confidence																	.	.	.	.	.	.																															.																											.	.
Template Conservation																	.	.	.	.	.	.																																																										.	.
Template Sequence		V	P	L	K	L	I	A	L	L	A	N	G	E	F	H	.	.	.	.	.	.	S	G	E	Q	L	G	E	T	L	G	M	S	R	A	A	I	N	K	H	I	Q	T	L	R	D	W	G	V	D	V	F	T	V	P	G	K	G	Y	S	L	P	E	P	I	Q	L	L	N	A	K	Q	I	L	G	Q	L	D	.	.
Template Known Secondary structure											T	T				B	.	.	.	.	.	.								T	T	T	S															T	T							T	T	T					S	S												T	T	S	S	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.																																																										.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	G	K	T	V	T	S	Q	V	L	I	F	E	I	M	P	A	P	P	A	I	A	S	Q	L	R	I	Q	I	N	E	Q	I	Y	F	S	R	R	V	R	F	V	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	G	S	V	A	V	L	P	V	I	D	S	T	N	Q	Y	L	L	D	R	I	G	E	L	K	S	G	D	A	C	I	A	E	Y	Q	Q	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	S	S									S								T	T	T	T	T			T	T									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions