Return to main results Retrieve Phyre Job Id

Job DescriptionP04335
Confidence99.81%DateThu Jan 5 10:58:13 GMT 2012
Rank131Aligned Residues216
% Identity13%Templated1xkla_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Hydroxynitrile lyase-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  PTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRF
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Template Sequence  KHFVLVHGACHGGWS. WYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLXELXESLSAD. EKVILVGHSL
Template Known Secondary structure 


TT

GGG.GTTTT



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   5....10......... 20.........30.........40.........50.........60.........70.. .......80..
 
   275....280.........290.........300.........310....... ..320.......
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Query Sequence  GANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMY. . . . . . . . . . . . . . . . . . . . . . . . . . . LDVLASRLGM
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Template Sequence  GGXNLGLAXEKYPQKIYAAVFLAAFXPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSXFFGPKFLAHKLYQ
Template Known Secondary structure 
GGGS




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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   328.330.........340.........350 .........360.........370.........380.........390.....
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Query Sequence  HDASDEALRVELNRYSLKVQGLL. . . . . . . . . GRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVY. . .
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Template Sequence  LCSPEDLALASSLVRPSSLFXEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHXAXL
Template Known Secondary structure  TS



B







TTTGGGS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   396...400.........410..
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Query Sequence  RNFDKGLQEITDWIEKR
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Template Conservation 
 
   
  
       
Template Sequence  CEPQKLCASLLEIAHKY
Template Known Secondary structure  S
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   243......250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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