Return to main results Retrieve Phyre Job Id

Job DescriptionP04335
Confidence99.49%DateThu Jan 5 10:58:13 GMT 2012
Rank211Aligned Residues235
% Identity16%Templated1qlwa_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases A novel bacterial esterase
Resolution1.09

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210... ......220.........230.........240.........250..
Predicted Secondary structure 













.....


















Query SS confidence 



































. . . . .






































Query Sequence  GAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSL. . . . . YERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHV
Query Conservation 
  
 
 
 

    
 
 

   
           .....    

 

 


  
 

 
 
       
       
Alig confidence 



































.....






































Template Conservation      

    
      






   
   
    

  
     
  

 
   
  
 
 
                
Template Sequence  VDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP
Template Known Secondary structure  S
TT

SS


TT

GGGGSS
TTS


TT


TTSTTS



TTSS
Template Predicted Secondary structure 












































Template SS confidence 















































































   47..50.........60.........70.........80.........90.........100.........110.........120......
 
   253......260....... ..270.........280.........290.........300.........310.........320.........
Predicted Secondary structure 







...
















Query SS confidence 














. . .





























































Query Sequence  LKALPNVPWVDHTRV. . . AAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHD
Query Conservation 

 
     

  

... 
 
 
 

  
   
   
 

 


  
                
      
    
   
Alig confidence 














...





























































Template Conservation                     
 
 
 
   
                                                 
Template Sequence  ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHS
Template Known Secondary structure  GGGS


B


TTSSSBTTB

TT

S
GGG


B
GGGS
SS
TSG
Template Predicted Secondary structure 





























Template SS confidence 















































































   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   330.........340... ......350.........360.........370 .........380.......
Predicted Secondary structure 



.............













.........




Query SS confidence 













. . . . . . . . . . . . .


























. . . . . . . . .
















Query Sequence  ASDEALRVELNRYS. . . . . . . . . . . . . LKVQGLLGRRCPTPMLSGYWKNDPFSP. . . . . . . . . EEDSRLITSSSADGKLL
Query Conservation               
.............
     

  
  




 
  
 


......... 
    

 
    


Alig confidence 













.............


























.........
















Template Conservation               
                          
 
   
  
                   
   
  
   
Template Sequence  QSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLM
Template Known Secondary structure  GGTT

TTS
S



GGG
GGGTTS

SS
TT
TTTTT

Template Predicted Secondary structure 
































Template SS confidence 















































































   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   388.390. .... ....400.........410..
Predicted Secondary structure 

.....



....

Query SS confidence 



. . . . .



. . . .
















Query Sequence  EIPF. . . . . NPVY. . . . RNFDKGLQEITDWIEKR
Query Conservation   
  .....    ....         
 


   
Alig confidence 



.....



....
















Template Conservation   

   
 
 

    
 
   

  
  

   
Template Sequence  SLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN
Template Known Secondary structure  GGGGT




TTGGGSTTT
Template Predicted Secondary structure 














Template SS confidence 

































   287..290.........300.........310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions