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Job DescriptionP04335
Confidence98.74%DateThu Jan 5 10:58:13 GMT 2012
Rank239Aligned Residues240
% Identity17%Templated1ivya_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Serine carboxypeptidase-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190. ........200.........210... ......220.........230. ...
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Query Sequence  FTVPGGAPITGFLHMPKGD. GPFPTVLMCGGLDAMQTDYYSL. . . . . . . . . . . . . . . . YERYFAPRGIAMLTIDMP. SVG
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Template Sequence  LKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVG
Template Known Secondary structure 
STT

SS
GGGS


TTTB
TTTTSS
TTSS

TT
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STTST
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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   235. ...240.........250.........260.........270.........280..... ....290.........300....
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Query Sequence  FS. . . . . . SKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYL. . . . ESPRLKAVACLGPVVHTLL
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Template Sequence  FSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQ
Template Known Secondary structure  T
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BSGGGTTS
TTTT
TTS
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SB
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   305....310.....
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Query Sequence  SDFKCQQQVPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEK
Template Known Secondary structure  TTSS
TT

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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   316...320.........330.. .......340..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MYLDVLASRLGMHDASD. . . . . . EALRVELNRY
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Template Sequence  DTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRL
Template Known Secondary structure  T


S
SSTTS





GGGT


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   266...270.........280.........290.........300.........310.........320.........330.........340.....
 
   343......350.... .....360.........370.........380.. .......390
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Query Sequence  SLKVQGLLGRRC. . . PTPMLSGYWKNDPFSPEEDSRLITSSSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGKLLEIP
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Template Sequence  YRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIK
Template Known Secondary structure 
SBST

TT
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   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   391.... ....400.........410..
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Query Sequence  FNPVY. . . RNFDKGLQEITDWIEKR
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Template Sequence  GAGHMVPTDKPLAAFTMFSRFLNKQ
Template Known Secondary structure  T

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   426...430.........440.........450
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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