Job Description P04335 Confidence 99.69% Date Thu Jan 5 10:58:13 GMT 2012 Rank 187 Aligned Residues 193 % Identity 15% Template c3u0vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lysophospholipase-like protein 1; PDBTitle: crystal structure analysis of human lyplal1 Resolution 1.72 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	.	.	.	.	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																												.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		L	Q	R	C	I	V	S	P	A	G	R	H	S	.	A	S	L	I	F	L	H	G	S	G	D	S	G	Q	G	L	R	M	W	I	K	Q	V	L	N	Q	D	L	T	F	Q	H	I	K	I	I	Y	P	T	A	P	P	R	S	Y	T	P	M	K	G	G	I	S	N	V	W	F	D	R	F	K	I	T	N	D	C
Template Known Secondary structure										S	S				.									T	T															T	S					S	S														G	G	G	T	T						S	S			S	S	S	S	S	S	S
Template Predicted Secondary structure															.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	.	.	.	.	.	.	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																																						.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		P	E	H	L	E	S	I	D	V	M	C	Q	V	L	T	D	L	I	D	E	E	V	K	S	G	I	K	K	N	R	I	L	I	G	G	F	S	M	G	G	C	M	A	M	H	L	A	Y	R	N	H	Q	D	V	A	G	V	F	A	L	S	S	F	L	N	K	A	S	A	V	Y	Q	A	L	Q	.	.	.	.	.
Template Known Secondary structure																									T	T			G	G	G							T															T	T	S	S						S					T	T									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	.	.	.	.	K	L	L	E	I	P	F	N
Query Conservation																																																																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	G	V	L	P	E	L	F	Q	C	H	G	T	A	D	E	L	V	L	H	S	W	A	E	E	T	N	S	M	L	K	S	L	G	V	T	T	K	F	H	S	F	P	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S											T	T		S	S	S															T	T									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		Y	H	.	E	L	S	K	T	E	L	D	I	L	K	L	W	I	L	T	K	L
Template Known Secondary structure			S	.	S
Template Predicted Secondary structure				.
Template SS confidence
		210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions