Job Description P04335 Confidence 99.80% Date Thu Jan 5 10:58:13 GMT 2012 Rank 135 Aligned Residues 222 % Identity 14% Template c3qmwD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site Resolution 2.50 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V
Query Conservation
Alig confidence																									.										.																																										.	.
Template Conservation																									.										.																																										.	.
Template Sequence		P	D	P	A	A	A	P	L	R	L	V	C	F	P	Y	A	G	G	T	V	S	A	F	.	R	G	W	Q	E	R	L	G	D	.	E	V	A	V	V	P	V	Q	L	P	G	R	G	L	R	L	R	E	R	P	Y	D	T	M	E	P	L	A	E	A	V	A	D	A	L	E	E	H	R	L	T	.	.	H	D	Y
Template Known Secondary structure				T	T	S		S									T	T			G	G	G	G	.	T	T							S	.	S									T	T	S	G	G	G	T	T	S					S														T	T	T		S	.	.	S	S
Template Predicted Secondary structure																									.										.																																										.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		A	L	F	G	H	S	M	G	A	L	L	A	Y	E	V	A	C	V	L	R	R	R	G	A	P	R	P	R	H	L	F	V	S	G	S	R	A	P	H	L	Y	G	D	R	A	D	H	T	L	S	D	T	A	L	R	E	V	I	R	D	L	G	G	L	D	D	T	L	G	A	A	Y	F	D	R	R	L	P	V	L
Template Known Secondary structure							T																T	T					S						S				G	G	G		S	S				T	T	S												T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
										345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																									.
Query SS confidence		.	.	.	.	.	.	.	.																																									.
Query Sequence		.	.	.	.	.	.	.	.	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	.	K	L	L	E	I	P	F	N	P	V	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation		.	.	.	.	.	.	.	.																																									.
Alig confidence		.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		R	A	D	L	R	A	C	E	R	Y	D	W	H	P	R	P	P	L	D	C	P	T	T	A	F	S	A	A	A	D	P	I	A	T	P	E	M	V	E	A	W	R	P	Y	T	T	G	S	F	L	R	R	H	L	P	G	N	H	F	F	L	N	G	G	P	S	R	D	R	L	L	A	H	L	G	T	E	L
Template Known Secondary structure										S									B	S	S								T	T		S	T	T							T	T	G	G	G	B	S	S								S	S		T	T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions