Job Description P04335 Confidence 100.00% Date Thu Jan 5 10:58:13 GMT 2012 Rank 1 Aligned Residues 392 % Identity 42% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	T	S	T	L	V	R	R	F	N	H	G	A	Q	P	P	V	Q	S	A	L	D	G	K	T	I	P	H	W	Y	R	M	I	N	R	L	M	W	I	W	R	G	I	D	P	R	E	I	L	D	V	Q	A	R	I	V	M	S	D	A	E	R	T	D	D	D	L	Y	D	T	V	I	G	Y	R	G	G	N	W
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		K	E	T	S	A	L	T	Q	Y	M	P	T	S	Q	.	.	S	L	L	D	E	I	K	E	K	N	G	F	S	W	Y	R	N	L	R	R	L	Q	W	V	W	Q	G	V	D	P	I	E	Q	E	Q	V	L	A	R	I	A	S	S	K	H	S	R	T	D	E	Q	W	L	D	T	V	M	G	Y	H	S	G	N	W
Template Known Secondary structure								S								.	.													S		S	S										T	T																		S		B	S		T	T	S	T	T		B		S	S	S	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	E	W	A	T	Q	A	M	V	W	Q	Q	K	A	C	A	E	D	D	P	Q	L	S	G	R	H	W	L	H	A	A	T	L	Y	N	I	A	A	Y	P	H	L	K	G	D	D	L	A	E	Q	A	Q	A	L	S	N	R	A	Y	E	E	A	A	Q	R	L	P	G	T	M	R	Q	M	E	F	T	V	P	G
Query Conservation
Alig confidence																		.																																																															.
Template Conservation																		.																																																															.
Template Sequence		A	Y	E	W	T	R	L	G	M	E	H	Q	K	R	A	G	.	E	M	T	N	E	A	A	S	E	A	L	F	S	A	S	L	C	Y	S	I	A	G	Y	P	H	L	K	S	D	N	L	A	I	Q	A	Q	V	L	A	N	S	A	Y	L	E	A	A	K	K	S	K	Y	I	I	K	Q	L	E	I	P	F	E	.
Template Known Secondary structure																G	G	.	G	S																					T	T			T	T																							S	S										T	.
Template Predicted Secondary structure																		.																																																															.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	P	I	T	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	K	I	T	A	H	L	H	L	T	N	T	D	K	P	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K	Y	P	L	T	E	D	Y	S	R	L	H	Q	A	V	L	N	E	L	F
Template Known Secondary structure		T										S		S	S	S											T	T	S		G	G	G							T	T	G	G	G	G	T									T	T	S	G	G	G	T	T	S				S		T	T										G	G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	P	Y	V	D	H	H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L	G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G
Template Known Secondary structure		G		T	T												T													T	G	G	G								S				S										T	T	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		E	L	N	R	Y	S	L	K	V	Q	G	.	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	K	L	L	E	I	P	F	N	P	V	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N	Q	M	V	A	F	F	S	T	Y	G	K	A	K	K	I	S	S	K	T	I	T	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L	E	D	E	L
Template Known Secondary structure			G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S											T	B	T	T								S	S		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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