Job Description P04335 Confidence 99.84% Date Thu Jan 5 10:58:13 GMT 2012 Rank 108 Aligned Residues 234 % Identity 15% Template c3ls2D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-formylglutathione hydrolase; PDBTitle: crystal structure of an s-formylglutathione hydrolase from2 pseudoalteromonas haloplanktis tac125 Resolution 2.20 Å

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		164	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure													.																	.	.	.																								.	.																						.	.	.
Query SS confidence													.																	.	.	.																								.	.																						.	.	.
Query Sequence		L	P	G	T	M	R	Q	M	E	F	T	.	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	.	.	.	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	.	.	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	.	.	.
Query Conservation													.																	.	.	.																								.	.																						.	.	.
Alig confidence													.																	.	.	.																								.	.																						.	.	.
Template Conservation
Template Sequence		S	G	G	W	H	K	Q	Y	T	H	S	A	V	S	T	H	C	T	M	R	F	A	V	F	L	P	P	G	A	S	E	S	N	K	V	P	V	L	Y	W	L	S	G	L	T	C	T	D	E	N	F	M	Q	K	A	G	A	F	K	K	A	A	E	L	G	I	A	I	V	A	P	D	T	S	P	R	G	D	N	V
Template Known Secondary structure		T	T											T	T	T	T											T	T		B	T	T	B											T	T			S							S										T								S	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
																					235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	S	K	W	K	L	T	Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																													.
Template Sequence		P	N	E	D	S	Y	D	F	A	Q	G	A	G	F	Y	V	N	A	T	Q	A	P	Y	N	T	H	F	N	M	Y	D	Y	V	V	N	E	L	P	A	L	I	E	Q	.	H	F	P	V	T	S	T	K	A	I	S	G	H	S	M	G	G	H	G	A	L	M	I	A	L	K	N	P	Q	D	Y	V	S	A	S	A
Template Known Secondary structure					S		T	T	S	B	T	T	B		T	T	S	B			S	T	T	T	T	T	T		B							T									.		S	S										B	T													S	T	T	T		S
Template Predicted Secondary structure																																													.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																							.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		F	S	P	I	V	N	P	I	N	C	P	W	G	V	K	A	F	T	G	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	K	T	T	W	A	Q	Y	D	S	C	K	L	M	A	K	.	.	.	A	E	Q	S	N	Y	L	P	M	L	V	S	Q	G	D	A	D	N	F	L	D	E	Q	L	K	P
Template Known Secondary structure			S			S		G	G	G	S												.	.	.	.	.	.	.	.	.	.	.	.		S							T	T								T	.	.	.			G	G	G										T	T		T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190													.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
			372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure		.																								.
Query SS confidence		.																								.
Query Sequence		.	E	D	S	R	L	I	T	S	S	S	A	D	G	K	L	L	E	I	P	F	N	P	V	.	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation		.																								.
Alig confidence		.																								.
Template Conservation
Template Sequence		Q	N	L	V	A	V	A	K	Q	K	D	Y	P	L	T	L	E	M	Q	T	G	Y	D	H	S	Y	F	F	I	S	S	F	I	D	Q	H	L	V	F	H	H	Q	Y	L
Template Known Secondary structure												T									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions