Job Description P04335 Confidence 99.73% Date Thu Jan 5 10:58:13 GMT 2012 Rank 170 Aligned Residues 197 % Identity 10% Template c3lp5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cell surface hydrolase; PDBTitle: the crystal structure of the putative cell surface hydrolase from2 lactobacillus plantarum wcfs1 Resolution 2.00 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	.	.	.	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.													.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.															.
Template Sequence		A	T	R	M	A	P	.	V	I	M	V	P	G	S	S	A	S	Q	N	R	F	.	D	S	L	I	T	E	L	G	K	E	T	P	K	K	H	S	V	L	K	L	T	V	Q	T	D	G	T	I	K	Y	S	G	S	I	A	A	N	D	N	E	P	F	I	V	I	G	F	A	N	N	R	D	G	K	A	N	I	D
Template Known Secondary structure				S				.								G	G	G					.											S	S	S											T	T	S										T	T		S	S								S					S
Template Predicted Secondary structure								.															.
Template SS confidence
		0	.	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	.	.	.	.	.	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L
Query Conservation																																																.	.	.	.	.
Alig confidence																			.	.																												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	A	V	W	L	N	T	A	F	K	A	L	V	K	T	Y	.	.	H	F	N	H	F	Y	A	L	G	H	S	N	G	G	L	I	W	T	L	F	L	E	R	Y	L	K	E	S	P	K	V	H	I	D	R	L	M	T	I	A	S	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	S	.	.			S								T													T	G	G	G	S	T	T										S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.							.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	.	.	.	.	.	.	G	K	L	L	E	I	P	F	N
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence		.	.	.	.																									.	.	.																																			.	.	.	.	.	.
Template Conservation		.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	M	E	S	T	S	T	T	A	K	T	S	M	F	K	E	L	Y	R	Y	R	T	G	L	P	.	.	.	E	S	L	T	V	Y	S	I	A	G	T	E	N	Y	T	S	D	G	T	V	P	Y	N	S	V	N	Y	G	K	Y	I	F	Q	D	Q	V	K	H	F	T	E	I	T	V	T	G	A	N	T
Template Known Secondary structure		.	.	.	.	T	T				S	S												T	G	G	G	S		.	.	.	T	T														T	T	T	B							T	T						T	T	T	S	S								T	T	T	T	B
Template Predicted Secondary structure		.	.	.	.																									.	.	.
Template SS confidence
						139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		393	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		P	V	Y	R	N	F	.	.	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L	C
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		A	H	S	D	L	P	Q	N	K	Q	I	V	S	L	I	R	Q	Y	L	L	A	E	T	M
Template Known Secondary structure		S	S																	T	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions