Job Description P04335 Confidence 99.81% Date Thu Jan 5 10:58:13 GMT 2012 Rank 127 Aligned Residues 229 % Identity 15% Template c3kxpD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:alpha-(n-acetylaminomethylene)succinic acid PDBTitle: crystal structure of e-2-(acetamidomethylene)succinate2 hydrolase Resolution 2.26 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	M	E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	S	S	L	L
Query Conservation
Alig confidence							.	.	.											.	.	.	.	.																											.	.
Template Conservation							.	.	.											.	.	.	.	.																											.	.
Template Sequence		R	R	V	D	I	.	.	.	G	R	I	T	L	N	V	R	E	K	.	.	.	.	.	G	S	G	P	L	X	L	F	F	H	G	I	T	S	N	S	A	V	F	E	P	L	X	I	R	L	.	.	S	D	R	F	T	T	I	A	V	D	Q	R	G	H	G	L	S	D	K	P	E	T	G	Y	E	A	N	D	Y
Template Known Secondary structure							.	.	.	S	S									.	.	.	.	.			S	S								T	T			G	G	G	G					T	T	T	.	.	T	T	T	S								T	T	S	T	T	S				S	S			S
Template Predicted Secondary structure							.	.	.											.	.	.	.	.																											.	.
Template SS confidence
		15	.	.	.	.				20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.											.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	.	.	.	.	.	.	.	.	.	.	P	E	M	Y	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		A	D	D	I	A	G	L	I	R	T	L	A	R	.	.	.	G	H	A	I	L	V	G	H	S	L	G	A	R	N	S	V	T	A	A	A	K	Y	P	D	L	V	R	S	V	V	A	I	D	F	T	P	Y	I	E	T	E	A	L	D	A	L	E	A	R	V	N	A	G	S	Q	L	F	E	D	I	K	A	V	E
Template Known Secondary structure														S	.	.	.	S	S							T														T	T	T								S			S																T					B	S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		319	320	.	.	.	.	.	.	.																						.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	A	S	R	L	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	L	A	G	R	Y	P	N	I	P	A	D	A	I	R	I	R	A	E	S	G	Y	Q	P	V	D	G	G	L	R	P	L	A	S	S	A	A	X	A	Q	T	A	R	G	L	R	S	D	L	V	P	A	Y	R	D	V	T	K	P	V	L	I	V	R	G	E	S	S	K	L	V	S	A	A	A	L	A	K	T
Template Known Secondary structure								S	T	T	S																	T	T					S	S												T	T	S											S								T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		T	S	S	S	A	D	G	K	L	L	E	I	P	F	N	P	V	Y	.	.	.	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		S	R	L	R	P	D	L	P	V	V	V	V	P	G	A	D	H	Y	V	N	E	V	S	P	E	I	T	L	K	A	I	T	N	F	I	D
Template Known Secondary structure					S	T	T	S						T	T			S																			T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions