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Job DescriptionP04335
Confidence99.16%DateThu Jan 5 10:58:13 GMT 2012
Rank227Aligned Residues216
% Identity12%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  PKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRV
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Template Sequence  PMVAR. . KTLFMLPDGGGSAFSYASL. PR. . LKSDTAVVGLNCPYARDPE. . NMNCTHGAMIESFCNEIRRRQPR. . GPY
Template Known Secondary structure  TTTSS..

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   1861.... ....1870.........1880.... .. ...1890.........1900..... ....1910.........1920........ .1930.
 
   268.270.........280.... .....290.........300.........310.........320.........330.........340....
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Query Sequence  AAFGFRFGANVAVRLAY. . . LESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSL
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Template Sequence  HLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFT
Template Known Secondary structure  TTT

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   1932.......1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010.
 
   345....350.. .......360.........370.........380.........390......
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Query Sequence  KVQGLLGR. . . . . . . . . . . . . . . . . . . . . . . . . . . . RCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYR
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Template Sequence  AVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPG. ASFDIVRADGANHFT
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   2012.......2020.........2030.........2040.........2050.........2060.........2070..... ....2080.........2090
 
   397..400 .........410...
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Query Sequence  NFDK. GLQEITDWIEKRL
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Template Sequence  LMQKEHVSIISDLIDRVM
Template Known Secondary structure  GGSTTTTT
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   2091........2100........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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