Job Description P04335 Confidence 99.89% Date Thu Jan 5 10:58:13 GMT 2012 Rank 69 Aligned Residues 245 % Identity 17% Template c3h2iA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:esterase; PDBTitle: crystal structure of n228w mutant of the rice cell wall2 degrading esterase lipa from xanthomonas oryzae Resolution 2.10 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.											.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.											.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	T	M	R	Q	M	E	F	T	V	P	G	G	.	.	.	.	A	P	I	T	G	F	L	H	M	P	.	.	.	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	.	.	.	.	.	.	.	.	.	.	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L
Query Conservation																	.	.	.	.											.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.											.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	V	R	V	A	E	F	T	Y	A	T	I	G	V	E	G	E	P	A	T	A	S	G	V	L	L	I	P	G	G	E	R	C	S	G	P	Y	P	L	L	G	W	G	H	P	T	E	A	L	R	A	Q	E	Q	A	K	E	I	R	D	A	K	G	D	D	P	L	V	T	R	L	A	S	Q	G	Y	V	V	V
Template Known Secondary structure		S														T	T	S														S	T	T			S														B	T	T										T	T	T		S					T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Query Sequence		T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	.	.	.	.	.	.	.	.	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	.	.	.	.	.	.	R	L	K	A
Query Conservation																			.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	D	Y	L	G	L	G	K	S	N	Y	A	Y	H	P	Y	L	H	S	A	S	E	A	S	A	T	I	D	A	M	R	A	A	R	S	V	L	Q	H	L	K	T	P	L	S	G	K	V	M	L	S	G	Y	S	Q	G	G	H	T	A	M	A	T	Q	R	E	I	E	A	H	L	S	K	E	F	H	L	V	A
Template Known Secondary structure						T	T	S	T	T				S	S			T	T																								T													T																	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.													310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	P	I	S	G	P	Y	A	L	E	Q	T	F	L	D	S	W	S	G	S	N	A	V	G	E	W	T	F	G	I	L	L	G	S	Y	A	I	V	A	M	Q	H	T	Y	K	N	I	Y	L	E	P	G	Q	V	F	Q	D	P	W	A	A	K	V	E	P	L	F	P	G	K	Q	S	L	T	D	M	F	L	N
Template Known Secondary structure						S			S	S									T	T	S			T	T				T	T																			S		S	S	G	G	G	T	B		T	T	T					G	G	G	S	S	B	S									T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
																											332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	.	.	.	A	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																															.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		D	T	L	P	S	I	D	K	V	K	S	Y	F	Q	P	G	F	Y	S	D	F	P	S	N	P	A	N	P	F	R	Q	D	L	A	R	N	N	L	L	E	.	.	.	.	.	W	A	P	Q	T	P	T	L	L	C	G	S	S	N	D	A	T	V	P	L	K	N	A	Q	T	A	I	A	S	F	Q	Q	R	G	S
Template Known Secondary structure		T	S	S			G	G	G					B												T	T									T	T				S	.	.	.	.	.	S				S								T	T	B	S	S	S		T												T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		384	.	.	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		G	K	L	L	E	I	P	F	.	.	.	.	.	.	N	P	V	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	V	A	L	V	D	T	G	T	G	N	A	S	D	N	S	A	F	A	H	M	L	T	K	E	S	C	I	V	V	V	R	D	Q	L
Template Known Secondary structure												S		G	G	G		B	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions