Job Description P04335 Confidence 99.97% Date Thu Jan 5 10:58:13 GMT 2012 Rank 15 Aligned Residues 301 % Identity 15% Template c3g8yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:susd/ragb-associated esterase-like protein; PDBTitle: crystal structure of a putative hydrolase (bvu_4111) from bacteroides2 vulgatus atcc 8482 at 1.90 a resolution Resolution 1.90 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	A	T	Q	A	M	V	W	Q	Q	K	A	C	A	E	D	D	P	Q	L	S	G	R	H	W	L	H	A	A	T	L	Y	N	I	A	A	Y	P	H	L	K	G	D	D	L	A	E	Q	A	Q	A	L	S	N	R	A	Y	E	E	A	A	Q	R	L	P	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	P	E	K	H	A	V	V	K	S	D	R	G	D	G	R	L	L	S	T	Y	A	I	V	H	E	X	L	K	D	T	H	P	Q	Y	A	Y	R	S	G	X	S	A	Q	E	F	T	Q	W	Q	D	G	V	R	A	A	X	V	E	I	X	K	F	P	E	I	K	R	Q	P	S	P	V	C	V	K	T	E	K
Template Known Secondary structure				G	G	G	G	S	S					S	T	T					S											T				T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
							168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																		.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	M	R	Q	M	E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	.	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A
Query Conservation		.	.	.	.	.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	G	Y	I	L	E	K	W	E	F	Y	P	F	P	K	S	V	S	T	F	L	V	L	K	P	E	H	L	K	G	A	V	P	G	V	L	C	I	P	G	S	G	R	T	K	E	G	L	V	G	E	P	G	I	C	D	K	L	T	E	D	Y	N	N	P	K	V	S	X	A	L	N	X	V	K	E	G	Y	V
Template Known Secondary structure			T	T											S	T	T											T	T			S											T	T							T	T				S	S	G	G	G				T	T	S	T	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	V	D	N	A	A	A	G	E	A	S	D	L	E	C	Y	D	K	G	W	N	Y	D	Y	D	V	V	S	R	F	L	L	E	L	G	W	S	W	L	G	Y	T	S	Y	L	D	X	Q	V	L	N	W	X	K	A	Q	S	Y	I	R	K	D	R	I	V	I	S	G	F	S	L	G	T	E	P	X	X	V
Template Known Secondary structure								T	T	S	G	G	G		S	S	G	G	G	T	T	T	T	S													T	T																				T		T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G
Query Conservation
Alig confidence								.												.	.	.	.	.	.	.																																							.	.
Template Conservation								.												.	.	.	.	.	.	.																																							.	.
Template Sequence		L	G	V	L	D	K	.	D	I	Y	A	F	V	Y	N	D	F	L	.	.	.	.	.	.	.	C	Q	T	Q	E	R	A	V	V	X	T	K	P	D	K	E	N	R	R	P	F	P	N	S	I	R	H	L	I	P	G	Y	W	R	Y	F	N	F	.	.	P	D	V	V	A	S	L	A	P	R	P	I	I	F	T
Template Known Secondary structure							T	.	T								S		B	.	.	.	.	.	.	.															T	T	S					S	S		G	G	G			T	T	G	G	G	T				.	.						T	T	T	T	S
Template Predicted Secondary structure								.												.	.	.	.	.	.	.																																							.	.
Template SS confidence
		265	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.								.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.														.	.	.	.	.	.	.	400	.	.	.	.																	.	.	.	.	.	410	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	K	L	L	E	I	P	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	Y	R	N	F	D	K	G	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	D	W	I	E	K	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		E	G	G	L	D	R	D	F	R	L	.	.	V	Q	S	A	Y	A	A	S	G	K	P	E	N	A	E	F	H	H	Y	P	K	F	A	D	K	A	V	R	K	D	V	E	H	L	D	E	G	L	D	S	K	T	Y	F	E	A	V	N	V	D	P	P	S	H	Y	F	K	N	E	L	V	I	P	W	L	R	K	V
Template Known Secondary structure		S		B								.	.								T	T		G	G	G							G	G	G		S	G	G	G	S				S	S			S											T	T			G	G	G		S
Template Predicted Secondary structure												.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		413
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		413

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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