Job Description P04335 Confidence 99.71% Date Thu Jan 5 10:58:13 GMT 2012 Rank 180 Aligned Residues 207 % Identity 14% Template c3fleB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:se_1780 protein; PDBTitle: se_1780 protein of unknown function from staphylococcus epidermidis. Resolution 2.01 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																				.	.	.	.	.	250
Predicted Secondary structure																																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	.	.	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	L	H	Q
Query Conservation																																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.															.													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.															.
Template Sequence		K	T	T	A	.	T	L	F	L	H	G	Y	G	G	S	E	R	S	E	.	T	F	X	V	K	Q	A	L	N	K	N	V	T	N	E	V	I	T	A	R	V	S	S	E	G	K	V	Y	F	D	K	K	L	S	A	A	N	P	I	V	K	V	E	F	K	D	N	K	N	G	N	F	K	E	N	A	Y	W	I	K
Template Known Secondary structure						.							T	T			G	G	G	G	.										T	T			S									T	T	S					S	S						S								S	S
Template Predicted Secondary structure						.															.
Template SS confidence
		44	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	.	.	.	.	.	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L
Query Conservation																																									.	.	.	.	.
Alig confidence														.	.																										.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation														.	.																																																										.	.	.	.	.	.	.
Template Sequence		E	V	L	S	Q	L	K	S	Q	F	G	I	.	.	Q	Q	F	N	F	V	G	H	S	X	G	N	X	S	F	A	F	Y	X	K	N	Y	G	D	D	R	H	L	P	Q	L	K	K	E	V	N	I	A	G	V	Y	N	G	I	L	N	X	N	E	N	V	N	E	I	I	V	D	.	.	.	.	.	.	.	K	Q
Template Known Secondary structure														.	.									T														T	T		T	T	S										S			T	T			B	T	T	T	B		T	T				B		.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure														.	.																																																										.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.							.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.														.
Query SS confidence																																																														.	.	.	.	.	.														.
Query Sequence		G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	K	.	.	.	.	.	.	L	L	E	I	P	F	N	P	V	Y	R	N	F	.
Query Conservation																																																														.	.	.	.	.	.														.
Alig confidence																																																														.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	K	P	S	R	X	N	A	A	Y	R	Q	L	L	S	L	Y	K	I	Y	C	G	K	E	I	E	V	L	N	I	Y	G	D	L	E	D	G	S	H	S	D	G	R	V	S	N	S	S	S	Q	S	L	Q	Y	L	L	R	G	S	T	K	S	Y	Q	E	X	K	F	K	G	A	K	A	Q	H	S	Q	L	H	E
Template Known Secondary structure				B	S	S							T	T	T	T	G	G	G	G	S	T	T	S													S	S	S	S	B	S	S	S	S	B						T							S			S									S	G	G	G	S	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
			399	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	K	G	L	Q	E	I	T	D	W	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		N	K	D	V	A	N	E	I	I	Q	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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