Job Description P04335 Confidence 99.83% Date Thu Jan 5 10:58:13 GMT 2012 Rank 112 Aligned Residues 239 % Identity 15% Template c3ed1E_ PDB info PDB header:hydrolase receptor Chain: E: PDB Molecule:gibberellin receptor gid1; PDBTitle: crystal structure of rice gid1 complexed with ga3 Resolution 1.90 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.													.	.	.	.																					.
Query SS confidence																										.	.													.	.	.	.																					.
Query Sequence		T	M	R	Q	M	E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	.	.	D	G	P	F	P	T	V	L	M	C	G	G	.	.	.	.	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	.	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W
Query Conservation																										.	.													.	.	.	.																					.
Alig confidence																										.	.													.	.	.	.																					.																	.
Template Conservation																																																																																	.
Template Sequence		G	V	S	S	F	D	H	I	I	D	Q	S	V	G	L	E	V	R	I	Y	R	A	D	A	P	A	A	E	P	F	P	V	I	I	F	F	H	G	G	S	F	V	H	S	S	A	S	S	T	I	Y	D	S	L	C	R	R	F	V	K	L	S	K	G	V	V	V	S	V	N	Y	R	R	A	P	E	H	R	Y	.
Template Known Secondary structure		T	B									T	T	T	T													S	S											S	T	T	T	S			T	T	B															T	S										T	T	T	S		T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																									.	.																								.	.	.																													.
Query SS confidence																									.	.																								.	.	.																													.
Query Sequence		K	L	T	Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	.	.	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	.	.	.	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	.
Query Conservation																									.	.																								.	.	.																													.
Alig confidence		.	.	.																					.	.																								.	.	.																													.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	C	A	Y	D	D	G	W	T	A	L	K	W	V	M	S	Q	P	F	M	R	S	A	Q	A	R	V	F	L	S	G	D	S	S	G	G	N	I	A	H	H	V	A	V	R	A	A	D	E	G	V	K	V	C	G	N	I	L	L	N	A	M	F	G	G	T	E	R	T	E	S	E	R	R	L	D	G
Template Known Secondary structure		.	.	.	T															T		T	T	T	B				B																								T	T				S												S	S									T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
							314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																										.	.
Query SS confidence		.	.	.	.	.																																																										.	.
Query Sequence		.	.	.	.	.	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	.	.	E	E	D	S	R	L	I	T	S	S	S	A	D	G	K	L
Query Conservation		.	.	.	.	.																																																										.	.
Alig confidence		.	.	.	.	.																																		.	.	.	.																					.	.
Template Conservation																																								.	.	.	.
Template Sequence		K	Y	F	V	T	L	Q	D	R	D	W	Y	W	K	A	Y	L	P	E	D	A	D	R	D	H	P	A	C	N	P	F	G	P	N	G	R	R	L	.	.	.	.	G	G	L	P	F	A	K	S	L	I	I	V	S	G	L	D	L	T	C	D	R	Q	L	A	Y	A	D	A	L	R	E	D	G	H	H	V	K	V
Template Known Secondary structure		T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T					.	.	.	.	T	T	S											T	T	S	T	T														T	T
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.								.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		L	E	I	P	F	N	P	V	Y	.	.	.	.	.	.	.	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	C	E	N	A	T	V	G	F	Y	L	L	P	N	T	V	H	Y	H	E	V	M	E	E	I	S	D	F	L	N	A	N	L
Template Known Secondary structure					T	T			T	T	G	G	G	S	S		S																	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions