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Job DescriptionP04335
Confidence99.86%DateThu Jan 5 10:58:13 GMT 2012
Rank88Aligned Residues226
% Identity14%Templatec3e3aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:possible peroxidase bpoc; PDBTitle: the structure of rv0554 from mycobacterium tuberculosis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  GGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKAL
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Template Sequence  RVINLAYDDN. . . . . GTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATE. NAEGFTTQTMVADTAALI
Template Known Secondary structure 


.....SSS

TT

GGGGTTTTTT

TTSGGGT.T

S

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   0......... 10.........20.........30.........40.........50..... ....60.........70...
 
   257..260.........270.........280.........290.........300.........310.......
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Query Sequence  PNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMY. . . . . . . . . . . . . . . . . . .
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Template Sequence  ETLDI. . . APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLEN
Template Known Secondary structure  TT
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ST
GGGS

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T




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   74.... .80.........90.........100.........110.........120.........130.........140.........150
 
   318.320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  . . . . . . . . . . . . LDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGK
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Template Sequence  FSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGR
Template Known Secondary structure  S
T
S




TSS
SS

TT

S
TT
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   386...390..... ....400.........410.
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Query Sequence  LLEIPFNPVY. . . RNFDKGLQEITDWIEK
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Template Sequence  YLQIPDAGHLGFFERPEAVNTAMLKFFAS
Template Known Secondary structure  TT

TTST
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   231........240.........250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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