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Job DescriptionP04335
Confidence99.87%DateThu Jan 5 10:58:13 GMT 2012
Rank82Aligned Residues219
% Identity8%Templatec3dyvA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:esterase d; PDBTitle: snapshots of esterase d from lactobacillus rhamnosus:2 insights into a rotation driven catalytic mechanism
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230.........240 .........250.........260........
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Query Sequence  DGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWK. . LTQDSSLLHQHVLKALPNVPWVDHTRVA
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Template Sequence  EGTDTGVVLLHAYTGSPNDM. NFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTA. KYAKVF
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Query Sequence  AFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQG
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Template Sequence  VFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTV
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   349 350.........360.........370.........380.... .....390..... ....400.........410.
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Query Sequence  L. LGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADG. . . KLLEIPFNPVY. . . . RNFDKGLQEITDWIEK
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Template Sequence  AADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQ
Template Known Secondary structure  TGGG

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   170.........180.........190.........200.........210.........220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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