Job Description P04335 Confidence 99.95% Date Thu Jan 5 10:58:13 GMT 2012 Rank 32 Aligned Residues 237 % Identity 14% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																									.	.	.										.																																					.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.										.																																					.	.	.	.	.	.	.	.
Query Sequence		M	R	Q	M	E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	.	.	.	D	G	P	F	P	T	V	L	M	.	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.										.																																					.	.	.	.	.	.	.	.
Alig confidence																									.	.	.										.																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	R	R	F	A	T	A	P	D	Q	T	K	I	P	L	S	V	V	Y	H	K	D	L	D	M	S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	L	P	Y	C	D	R	G	M	I	F	A	I	A	H	I	R	G	G	S	E	L	G	R	A	W	Y	E	I
Template Known Secondary structure										T	T												T	T	S		T	T	S												T	T									G	G	G					T	T	T									T	T	S		T	T		T					T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	K	W	K	L	T	Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E
Query Conservation
Alig confidence																																																																				.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		G	A	K	Y	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L	T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D	L	F	K	V	A	L	A	G	V	P	F	V	D	.	.	.	.	.	V	M	T	T	M	C	D	P	S
Template Known Secondary structure		T	S	S	G	G	G	T																	T	T	S			G	G	G							T														G	G	G		S						S					.	.	.	.	.						T		T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.						.	.	.	.	610	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																		.	.	.	.																.
Query SS confidence																																												.																		.	.	.	.																.
Query Sequence		M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	.	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	.	.	.	.	R	L	I	T	S	S	S	A	D	G	K	L	L	E	I	.
Query Conservation																																												.																		.	.	.	.																.
Alig confidence																																	.	.	.	.								.																		.	.	.	.																.
Template Conservation																																	.	.	.	.
Template Sequence		I	P	L	T	T	G	E	W	E	E	W	G	N	P	N	E	Y	K	Y	Y	D	Y	M	L	S	Y	S	P	M	D	N	.	.	.	.	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y	W	E	P	A	K	W	V	S	K	L	R	E	C	K	T	D	N	N	E	I	L	L	N
Template Known Secondary structure		S	T	T					T	T	T	T			T	T	S												T	G	G	G	.	.	.	.			S	S											T	T		S	S	S		T																S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.					.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
				390	.	.	.	.	.	.	.	.	.						400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure		.	.											.	.	.	.	.
Query SS confidence		.	.											.	.	.	.	.
Query Sequence		.	.	P	F	N	P	V	Y	R	N	F	D	.	.	.	.	.	K	G	L	Q	E	I	T	D	W	I	E	K	R	L
Query Conservation		.	.											.	.	.	.	.
Alig confidence		.	.											.	.	.	.	.
Template Conservation
Template Sequence		I	D	M	E	S	G	H	F	S	A	K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K	H	L
Template Known Secondary structure				T	T			S	S			S	S																			T
Template Predicted Secondary structure
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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