Job Description P04335 Confidence 99.94% Date Thu Jan 5 10:58:13 GMT 2012 Rank 37 Aligned Residues 248 % Identity 15% Template c2vavL_ PDB info PDB header:transferase Chain: L: PDB Molecule:acetyl-coa--deacetylcephalosporin c PDBTitle: crystal structure of deacetylcephalosporin c2 acetyltransferase (dac-soak) Resolution 2.5 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.
Predicted Secondary structure																.												.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																.												.	.	.	.	.																																				.	.	.	.	.
Query Sequence		E	E	A	A	Q	R	L	P	G	T	M	R	Q	M	.	E	F	T	V	P	G	G	A	P	I	T	.	.	.	.	.	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	.	.	.	.	.	F	A	P	R	G	I	A	M	L
Query Conservation																.												.	.	.	.	.																																				.	.	.	.	.
Alig confidence																.												.	.	.	.	.																																				.	.	.	.	.
Template Conservation
Template Sequence		R	F	E	A	S	L	D	A	Q	D	I	A	R	I	S	L	F	T	L	E	S	G	V	I	L	R	D	V	P	V	A	Y	K	S	W	G	R	M	N	V	S	R	D	N	C	V	I	V	C	H	T	L	T	S	S	A	H	V	T	S	W	W	P	T	L	F	G	Q	G	R	A	F	D	T	S	R	Y	F	I	I
Template Known Secondary structure						T	S														T	T	S														S				T	T	S										T	T			S		G	G	G	T	S	G	G	G	B	S	T	T	S	S	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	L	K
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		C	L	N	Y	L	G	S	P	F	G	S	A	G	P	C	S	P	D	P	D	P	Y	G	A	K	F	P	R	T	T	I	R	D	D	V	R	I	H	R	Q	V	L	D	R	L	.	.	.	.	.	.	G	V	R	Q	I	A	A	V	V	G	A	M	G	G	M	H	T	L	E	W	A	F	F	G	P	E	Y	V	R
Template Known Secondary structure						T	T		S	S	S	S	S	S	T	T	S							G	G	G																					.	.	.	.	.	.	T																				G	G	G		T	T	T	B
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	P	I	A	T	S	C	R	Q	S	G	W	C	A	A	W	F	E	T	Q	R	Q	C	I	Y	D	D	P	K	Y	L	D	G	E	Y	D	V	D	D	Q	P	V	R	G	L	E	T	A	R	K	I	A	N	L	T	Y	K	S	K	P	A	M	D	E	R	F	H	M	Q	P	I	E	A	V	S	S	Y	L
Template Known Secondary structure						B	S			S	B																		T		T	T	S	G	G	G	T			T	T	S																	T	S									S	B			B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
																																342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G	K	L	L	E	I	P	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation
Template Sequence		R	Y	Q	A	Q	K	F	A	A	S	F	D	A	N	C	Y	I	A	M	T	L	K	F	D	T	H	D	I	S	R	G	R	A	G	S	I	P	E	A	L	A	M	I	T	Q	P	A	L	I	I	C	A	R	S	D	G	L	Y	S	F	D	E	H	V	E	M	G	R	S	I	P	N	S	R	L	C	V	V	D	T
Template Known Secondary structure											T	S												G	G	G		B	T	T	T	T	T		S	S						T	T			S								T	T		S	S	S												S	T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		391	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		F	N	P	V	Y	.	.	.	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		N	E	G	H	D	F	F	V	M	E	A	D	K	V	N	D	A	V	R	G	F	L	D	Q
Template Known Secondary structure		S			T	T					T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions