Job Description P04335 Confidence 99.90% Date Thu Jan 5 10:58:13 GMT 2012 Rank 63 Aligned Residues 233 % Identity 12% Template c2qruA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an alpha/beta hydrolase superfamily protein from2 enterococcus faecalis Resolution 1.65 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	.	.	.	L	D	A	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T	Q	D	S	S	L	L
Query Conservation																																	.	.	.
Alig confidence															.	.	.																.	.	.
Template Conservation															.	.	.
Template Sequence		N	Q	T	L	A	N	G	A	T	V	T	I	Y	.	.	.	P	T	T	T	E	P	T	N	Y	V	V	Y	L	H	G	G	G	X	I	Y	G	T	K	S	D	L	P	E	E	L	K	E	L	F	T	S	N	G	Y	T	V	L	A	L	D	Y	L	L	A	P	N	T	K	I	D	H	I	L	R	T	L	T	E	T
Template Known Secondary structure						T	T	S							.	.	.			S	S	S	S										S	T	T	T	S			G	G	G											T	T	T											T	T	T	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300																						.	.	.	.
Predicted Secondary structure																																											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	E	S	P	R	.	.	.	L	K	A	V	A	C	L	G	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	L	L
Query Conservation																																											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																														.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		F	Q	L	L	N	E	E	.	.	.	.	.	I	I	Q	N	Q	S	F	G	L	C	G	R	S	A	G	G	Y	L	X	L	Q	L	T	K	Q	L	Q	T	L	N	L	T	P	Q	F	L	V	N	F	Y	G	Y	T	D	L	E	F	I	K	E	P	R	K	L	L	K	Q	A	I	S	A	K	E	I	A	A	I	D
Template Known Secondary structure									.	.	.	.	.	T	T	T	T									T																T	T				S						S			S		S	G	G	G	G	S				S		S	S				S	G	G	G	T	T	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	S	A	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	K	P	V	W	D	D	P	F	L	S	R	Y	L	L	Y	H	Y	S	I	Q	Q	A	L	L	P	H	F	Y	G	L	P	E	N	G	D	W	S	A	Y	A	L	S	D	E	T	L	K	T	F	P	P	C	F	S	T	A	S	S	S	D	E	E	V	P	F	R	Y	S	K	K	I	G	R	T	I	P	E	S
Template Known Secondary structure			S	S			S			T	T		T	T										T	T							T			T	T	S			G	G	G									T	S									T	T		S	S	S		T										S	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		K	L	L	E	I	P	F	N	P	V	.	.	.	.	.	.	.	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	K	A	V	Y	Y	L	E	H	D	F	L	K	Q	T	K	D	P	S	V	I	T	L	F	E	Q	L	D	S	W	L	K	E	R
Template Known Secondary structure								S			S		G	G	G	G	T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions