Job Description P04335 Confidence 99.36% Date Thu Jan 5 10:58:13 GMT 2012 Rank 220 Aligned Residues 215 % Identity 12% Template c2qm0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:bes; PDBTitle: crystal structure of bes protein from bacillus cereus Resolution 1.84 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																.															.	.	.																			.	.
Query SS confidence																.															.	.	.																			.	.
Query Sequence		R	L	P	G	T	M	R	Q	M	E	F	T	V	P	.	G	G	A	P	I	T	G	F	L	H	M	P	K	G	.	.	.	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	M	Q	T	.	.	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S
Query Conservation																.															.	.	.																			.	.
Alig confidence																.															.	.	.																			.	.
Template Conservation
Template Sequence		I	I	T	S	N	T	E	Q	W	K	X	Y	S	K	L	E	G	K	E	Y	Q	I	H	I	S	K	P	K	Q	P	A	P	D	S	G	Y	P	V	I	Y	V	L	D	G	N	A	F	F	Q	T	F	H	E	A	V	K	I	Q	S	V	R	A	E	K	T	G	V	S	P	A	I	I	V	G	V	G	Y	P	I	E
Template Known Secondary structure					T	T									T	T	T												S	S				T	T									S																G	G	G																	S		S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.																																.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	W	K	L	T	Q	D	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																.
Template Sequence		G	A	F	S	G	E	E	R	C	Y	D	F	T	P	S	V	I	S	K	D	A	P	L	K	P	D	G	K	P	W	P	K	T	G	G	A	H	N	F	F	T	F	I	E	E	E	L	K	P	Q	I	E	K	N	F	E	I	D	K	G	K	Q	.	T	L	F	G	H	L	G	G	L	F	A	L	H	I	L	F	T
Template Known Secondary structure		S	S			S									S	S				T	T					T	T																				T									S								.
Template Predicted Secondary structure																																																																.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L	D	V	L	A	S	R	L	G	M	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	N	A	F	Q	N	Y	F	I	S	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	W	W	N	N	K	S	V	L	E	K	E	E	N	L	I	I	E	L	N	N	A	K	F	E	T	G	V	F	L	T	V	G	S	L
Template Known Secondary structure			G	G	G		S						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					G	G	G	G	G	T	T										S	S										T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.																																.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380								.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		D	P	F	S	P	E	E	D	S	R	L	I	T	S	S	.	.	.	.	.	.	.	S	A	D	G	K	L	L	E	I	P	F	N	P	V	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	E	H	X	V	V	G	A	N	E	L	S	E	R	L	L	Q	V	N	H	D	K	L	K	F	K	F	Y	E	A	E	G	E	N	H	A	S	V	V	P	T	S	L	S	K	G	L	R	F	I
Template Known Secondary structure		S																					T	T									T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions