Job Description P04335 Confidence 99.91% Date Thu Jan 5 10:58:13 GMT 2012 Rank 56 Aligned Residues 242 % Identity 15% Template c2q0xA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: alpha/beta hydrolase fold protein of unknown function Resolution 2.20 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		P	G	T	M	R	Q	M	E	F	T	V	P	G	G	A	P	I	T	G	F	L	H	M	P	K	G	D	G	P	F	P	T	V	L	M	C	G	G	L	D	A	.	.	M	Q	T	D	Y	Y	S	L	Y	E	R	Y	F	A	P	R	G	I	A	M	L	T	I	D	M	P	S	V	G	F	S	S	K	W	K	L	T
Query Conservation																																											.	.
Alig confidence																														.	.	.											.	.														.
Template Conservation																														.	.	.																										.
Template Sequence		P	V	Q	G	H	L	F	T	Y	Y	K	D	P	Y	C	K	I	P	V	F	M	M	N	M	D	A	R	R	.	.	.	C	V	L	W	V	G	G	Q	T	E	S	L	L	S	F	D	Y	F	T	N	L	A	E	E	L	.	Q	G	D	W	A	F	V	Q	V	E	V	P	S	G	K	I	G	S	G	P	Q	D	H
Template Known Secondary structure														T	T										T	T	S	S	S	.	.	.								T	T			T	T		S	T	T									.	T	T	T									G	G	G	S	T	T	S		S
Template Predicted Secondary structure																														.	.	.																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																.	.
Query SS confidence																																													.	.																.	.
Query Sequence		Q	D	S	S	L	L	H	Q	H	V	L	K	A	L	P	N	V	P	W	V	D	H	T	R	V	A	A	F	G	F	R	F	G	A	N	V	A	V	R	L	A	Y	L	.	.	E	S	P	R	L	K	A	V	A	C	L	G	P	V	V	.	.	H	T	L	L	S	D	F	K	C	Q	Q	Q	V	P	E	M	Y	L
Query Conservation																																													.	.																.	.
Alig confidence																						.	.																						.	.																.	.
Template Conservation																						.	.
Template Sequence		A	H	D	A	E	D	V	D	D	L	I	G	I	L	L	R	D	H	C	M	.	.	N	E	V	A	L	F	A	T	S	T	G	T	Q	L	V	F	E	L	L	E	N	S	A	H	K	S	S	I	T	R	V	I	L	H	G	V	V	C	D	P	E	N	P	L	F	T	P	E	G	C	A	A	R	K	E	H	V	E
Template Known Secondary structure																			S			.	.									G	G	G												T	T	G	G	G													T	T	S	T	T	T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		319	320	.	.	.	.	.	.	.																							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query Sequence		D	V	L	A	S	R	L	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	A	S	D	E	A	L	R	V	E	L	N	R	Y	S	L	K	V	Q	G	L	L	G	R	R	C	P	T	P	M	L	S	G	Y	W	K	N	D	P	F	S	P	E	E	D	S	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Conservation
Template Sequence		K	L	M	A	E	G	R	G	E	D	S	L	A	M	L	K	H	Y	D	I	P	I	T	P	A	R	L	A	G	G	G	F	P	T	L	Q	E	A	V	W	N	P	C	I	R	K	E	F	D	V	L	R	R	S	V	G	V	I	K	V	P	L	L	L	M	L	A	H	N	V	Q	Y	K	P	S	D	E	E	V	G
Template Known Secondary structure							T		T	T		G	G	G	G	T	T	T		S	S									T		S		S	S					T						T	T								T	G	G	G			S										T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
					375	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.							.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure		.	.	.								.	.														.	.	.	.	.	.
Query SS confidence		.	.	.								.	.														.	.	.	.	.	.
Query Sequence		.	.	.	R	L	I	T	S	S	S	.	.	A	D	G	K	L	L	E	I	P	F	N	P	V	.	.	.	.	.	.	Y	R	N	F	D	K	G	L	Q	E	I	T	D	W	I	E	K	R
Query Conservation		.	.	.								.	.														.	.	.	.	.	.
Alig confidence		.	.	.								.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	L	E	G	V	R	D	H	T	G	C	N	R	V	T	V	S	Y	F	N	D	T	C	D	E	L	R	R	V	L	K	A	A	E	S	E	H	V	A	A	I	L	Q	F	L	A	D	E
Template Known Secondary structure											S	S	S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions