Return to main results Retrieve Phyre Job Id

Job DescriptionP04335
Confidence99.96%DateThu Jan 5 10:58:13 GMT 2012
Rank19Aligned Residues247
% Identity18%Templatec2hdwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical protein pa2218; PDBTitle: crystal structure of hypothetical protein pa2218 from pseudomonas2 aeruginosa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190 .........200.........210.........220.........230.........240..
Predicted Secondary structure 










..

























Query SS confidence 

























. .



















































Query Sequence  PGTMRQMEFTVPGGAPITGFLHMPKG. . DGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLT
Query Conservation        
 

   
  
 
 
 

  ..  
 
 

   
               

 

 


  
 

 
 
      
Alig confidence 

























..



















































Template Conservation   
    
   
 

  
      
        
 

  

            
  

  
  
   
 

 
 
      
Template Sequence  KVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRN
Template Known Secondary structure  T
TTS
TT

SS


TT

TTTTT


TTSTTS

SSSS
Template Predicted Secondary structure 





































Template SS confidence 















































































   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   243.. ....250.........260.........270.........280.........290.........300.........310........
Predicted Secondary structure 

....




















Query SS confidence 


. . . .








































































Query Sequence  QDS. . . . SLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYL
Query Conservation   
 ....      


 
     

  

 
 
 
 

  
   
   
 

 


  
                
    
Alig confidence 


....









































.





























Template Conservation                                  
 
 
   
   
    .                              
Template Sequence  VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK. RVKAVVTSTMYDMTRVMSKGYNDSVTLEQR
Template Known Secondary structure 


TTSTTT
T.TS


TGGG


Template Predicted Secondary structure 

















.



























Template SS confidence 















































































   145....150.........160.........170.........180.........190... ......200.........210.........220...
 
   319320....... ..330.........340.........350..
Predicted Secondary structure 

..............................................








Query SS confidence 








. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
























Query Sequence  DVLASRLGM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HDASDEALRVELNRYSLKVQGLLGR
Query Conservation    
    
 ..............................................               

     

 
Alig confidence 








..............................................
























Template Conservation                                                                                  
Template Sequence  TRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKE
Template Known Secondary structure  SS

B
S
TT


SS

TSTTT

TT
TTTT


BTTTTTS
S
TTGGG
Template Predicted Secondary structure 








































Template SS confidence 















































































   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   353......360.........370.........380.........390......... 400.........410...
Predicted Secondary structure 























....
Query SS confidence 














































. . . .













Query Sequence  RCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFD. . . . KGLQEITDWIEKRL
Query Conservation   
  




 
  
 


 
    

 
    


 
          ....     
 


   
Alig confidence 




















.
























....













Template Conservation      
 


 
  
   
   .           
    
 

              
  

  

Template Sequence  ISPRPILLIHGERAHSRYFSE. TAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL
Template Known Secondary structure  STTS
TT
TT.S
SSTT

ST
TTTS

Template Predicted Secondary structure 










.













Template SS confidence 
































































   304.....310.........320.... .....330.........340.........350.........360.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions