 |
Job Description | P04335 | Confidence | 64.65% | Date | Thu Jan 5 10:58:13 GMT 2012 |
Rank | 300 | Aligned Residues | 58 |
% Identity | 12% | Template | c1whsB_ |
PDB info |
PDB header:serine carboxypeptidase | Chain: B: PDB Molecule:serine carboxypeptidase ii; |
PDBTitle: structure of the complex of l-benzylsuccinate with wheat serine2 carboxypeptidase ii at 2.0 angstroms resolution
|
Resolution | 2.00 Å |
|
 |
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
. | . | . | . | 400 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | P | M | L | S | G | Y | W | K | N | D | P | F | S | P | E | E | D | S | R | L | I | T | S | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | G | K | L | L | E | I | P | F | N | P | V | Y | . |
. |
. |
R | N | F | D | K | G | L | Q | E | I | T | D |
Query Conservation |   |
  |   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |
Template Sequence |   |
G | L | R | I | W | V | F | S | G | D | T | D | A | V | V | P | L | T | A | T | R | Y | S | I | G | A | L | G | L | P | T | T | T | S | W | Y | P | W | Y | D | D | Q | E | V | G | G | W | S | Q | V | Y | K | G | L | T | L | V | S | V | R | G | A | G | H | E | V | P | L | H | R | P | R | Q | A | L | V | L | F | Q | Y |
Template Known Secondary structure |   |
T |
|
|
|  |  |  |  |  | T | T |
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |
|
| S | S |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
324 | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |
  |
  |   |
408 | . | 410 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
W | I | E | K | R |
Query Conservation |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
Template Sequence |   |
F | L | Q | G | K |
Template Known Secondary structure |   |
 |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
  |   |
414 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|