Job Description P39306 Confidence 100.00% Date Thu Jan 5 11:59:10 GMT 2012 Rank 10 Aligned Residues 168 % Identity 20% Template c3m4rA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	V	F	E	A	N	M	E	L	P	R	Y	G	L	V	T	F	T	W	G	N	V	S	A	I	D	R	E	R	G	.	.	.	.	.	.	.	L	V	V	I	K	P	S	G	V	A	Y	E	T	M	K	A	A	D	M	V	V	V	D	M	S	G	K	V	V	E	G	E	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	V	V	Y	G	S	R	L	I	G	S	D	P	D	L	V	L	G	G	G	N	T	S	V	K	T	T	E	R	D	H	A	G	R	I	I	S	V	L	R	V	K	N	S	G	S	N	L	G	T	I	D	S	R	G	F	T	G	I	R	X	D	D	A	L	A	A	A	K	I	D	K	X	T	D	E	A	X	V
Template Known Secondary structure													T		T	T	T																T	T	S										B	T	T	S		G	G	G			G	G	G												G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	S	S	D	T	A	T	H	L	E	L	Y	R	R	Y	P	S	L	G	G	I	V	H	T	H	S	T	H	A	T	A	W	A	Q	A	G	L	A	I	P	A	L	G	T	T	H	A	D	Y	F	F	G	D	I	P	C	T	R	G	L	S	E	E	E	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.																				.	.	.	.
Template Conservation																												.	.	.	.	.																						.	.	.	.	.																				.	.	.	.
Template Sequence		D	Y	L	K	K	S	X	V	N	P	S	E	P	S	P	S	V	E	T	F	L	H	A	F	L	P	.	.	.	.	.	Y	K	F	V	X	H	S	H	A	D	A	I	L	S	I	T	N	T	D	L	P	.	.	.	.	.	S	D	Q	I	A	K	I	L	G	N	V	V	V	L	P	Y	I	P	P	.	.	.	.
Template Known Secondary structure							T	B	S	S	T	T	S			B		T	T						T	S		.	.	.	.	.	S	S															T	S	S			.	.	.	.	.										S									S	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.																						.	.	.	.	.																				.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	E	L	N	T	G	K	V	I	I	E	T	L	G	N	A	E	P	L	H	T	P	G	I	V	V	Y	Q	H	G	P	F	A	W	G	K	D	A	H	D	A	V	H	N	A	V	V	M	E	E	V	A	K	M	A	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	F	T	L	A	K	E	V	X	N	C	F	K	K	G	I	D	G	I	V	L	R	K	H	G	L	L	T	F	G	D	T	G	K	E	A	Y	D	R	H	I	N	I	V	S	R	A	E	N	F	I
Template Known Secondary structure		.	.	.	.	.	.	.	S													T	T		S					T	T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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