Return to main results Retrieve Phyre Job Id

Job DescriptionP39306
Confidence3.41%DateThu Jan 5 11:59:10 GMT 2012
Rank81Aligned Residues39
% Identity13%Templatec3lhnB_
PDB info PDB header:lipid binding proteinChain: B: PDB Molecule:lipoprotein; PDBTitle: crystal structure of putative lipoprotein (np_718719.1) from2 shewanella oneidensis at 1.42 a resolution
Resolution1.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60........
Predicted Secondary structure 


















Query SS confidence 







































Query Sequence  SAIDRERGLVVIKPSGVAYETMKAADMVVVDMSGKVVEGE
Query Conservation 
 
  
     




     
   

  

  
    
 
Alig confidence 



.


































Template Conservation     
.      
 
     
 
    
  

  
  
   
Template Sequence  KFDW. DSNGSKITLSDGSKYLVGENQLLXLDTEGNRITGG
Template Known Secondary structure 
.
TTS

TTS
TT

TTS



ST
Template Predicted Secondary structure  .




















Template SS confidence 







































   100... ......110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions