Job Description P39306 Confidence 4.56% Date Thu Jan 5 11:59:10 GMT 2012 Rank 43 Aligned Residues 86 % Identity 17% Template c2d6fA_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln) Resolution 3.15 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.
Predicted Secondary structure																.																				.	.											.	.																								.
Query SS confidence																.																				.	.											.	.																								.
Query Sequence		L	V	T	F	T	W	G	N	V	S	A	I	D	R	.	E	R	G	L	V	V	I	K	P	S	G	V	A	Y	E	T	M	K	A	.	.	A	D	M	V	V	V	D	M	S	G	.	.	K	V	V	E	G	E	Y	R	P	S	S	D	T	A	T	H	L	E	L	Y	R	R	Y	.	P	S	L	G	G	I	V	H
Query Conservation																.																				.	.											.	.																								.
Alig confidence																.																				.	.											.	.																								.
Template Conservation
Template Sequence		S	I	I	S	T	G	G	T	V	A	S	I	I	D	Y	R	T	G	A	V	H	P	A	F	T	A	D	D	L	L	R	A	N	P	E	L	L	D	I	A	N	I	R	G	R	A	V	F	N	I	L	S	E	N	M	K	P	E	Y	W	V	E	T	A	R	A	V	Y	G	E	I	K	D	G	A	D	G	V	V	V
Template Known Secondary structure						S	S									T	T	T	S								T	T							G	G	G	G	G	T													G	G	G																			T	T		S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	S	T	H	A	T	A	W	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	G	T	D	T	M	H	Y	T	S	A
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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