Job Description P39306 Confidence 9.94% Date Thu Jan 5 11:59:10 GMT 2012 Rank 26 Aligned Residues 84 % Identity 14% Template c1zq1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.
Predicted Secondary structure																.																					.	.	.	.	.																																.
Query SS confidence																.																					.	.	.	.	.																																.
Query Sequence		L	V	T	F	T	W	G	N	V	S	A	I	D	R	.	E	R	G	L	V	V	I	K	P	S	G	V	A	Y	E	T	M	K	A	A	.	.	.	.	.	D	M	V	V	V	D	M	S	G	K	V	V	E	G	E	Y	R	P	S	S	D	T	A	T	H	L	E	L	Y	R	R	.	Y	P	S	L	G	G	I	V
Query Conservation																.																					.	.	.	.	.																																.
Alig confidence																.																					.	.	.	.	.									.																							.
Template Conservation																																																		.
Template Sequence		T	I	I	G	T	G	G	T	I	A	S	R	I	D	Y	E	T	G	A	V	Y	P	A	F	T	A	E	E	L	A	K	A	L	P	E	I	F	E	V	A	N	V	K	P	K	L	L	F	.	N	I	F	S	E	D	X	K	P	K	H	W	V	K	I	A	H	E	V	A	K	A	L	N	S	G	D	Y	G	V	V
Template Known Secondary structure						S	S									T	T	T	T																G	G	G	G	G	T	S									.				G	G	G																				T		S
Template Predicted Secondary structure																																																		.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	H	S	T	H	A	T	A	W	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	H	G	T	D	T	X	G	Y	T	A
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions