Job Description P39306 Confidence 4.19% Date Thu Jan 5 11:59:10 GMT 2012 Rank 49 Aligned Residues 105 % Identity 11% Template c1hyhA_ PDB info PDB header:oxidoreductase (choh(d)-nad+(a)) Chain: A: PDB Molecule:l-2-hydroxyisocaproate dehydrogenase; PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits Resolution 2.20 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																									.	.	.	.																								.
Query SS confidence																																									.	.	.	.																								.
Query Sequence		A	Y	E	T	M	K	A	A	D	M	V	V	V	D	M	S	G	K	V	V	E	G	E	Y	R	P	S	S	D	T	A	T	H	L	E	L	Y	R	R	.	.	.	.	Y	P	S	L	G	G	I	V	H	T	H	S	T	H	A	T	A	W	A	Q	A	G	L	.	A	I	P	A	L	G	T	T	H	A	D	Y	F
Query Conservation																																									.	.	.	.																								.
Alig confidence																																									.	.	.	.																								.						.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		D	W	A	A	L	A	D	A	D	V	V	I	S	T	L	G	N	I	K	L	Q	Q	F	A	E	L	K	F	T	S	S	M	V	Q	S	V	G	T	N	L	K	E	S	G	F	H	G	V	L	V	V	I	S	N	P	V	D	V	I	T	A	L	F	Q	H	V	T	G	F	P	A	H	.	.	.	.	.	K	V	I
Template Known Secondary structure			G	G	G	G	T	T		S							S		G	G	G	T			T	T																		T	T			S						S	S	S																G	G	.	.	.	.	.	G
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	I	P	C	T	R	G	L	S	E	E	E	V	Q	G	E	Y	E	L	N	T	G	K	V	I	I	E	T	L	G	N	A	E	P	L	H	T	P	G	I	V	V	Y	Q	H	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	T	A	R	M	Q	R	A	V	G	E	A	F	D	L	D	P	R	S	V	S	G	Y	N	L	G	E	H	G
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.																T			G	G	G		B					B		T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions