Return to main results Retrieve Phyre Job Id

Job DescriptionP37751
Confidence26.01%DateThu Jan 5 11:57:28 GMT 2012
Rank89Aligned Residues138
% Identity12%Templated1rcua_
SCOP infoMCP/YpsA-like MCP/YpsA-like MoCo carrier protein-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200...... ...210.........220.........230.........240.........250.........260......
Predicted Secondary structure 

..



























..........
Query SS confidence 







. .



























































. . . . . . . . . .
Query Sequence  LTIFYPAV. . PRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEK. . . . . . . . . .
Query Conservation    

 


..    

   

 
   
                                
          ..........
Alig confidence 







..



























































..........
Template Conservation    
   

            
  

  

  
  




  


 
   

   

 
 

 
                 
Template Sequence  VVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVXELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGL
Template Known Secondary structure 

S
TTSTTTGGGTT


SSTT

STT



TT
S


Template Predicted Secondary structure 































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   267..270.........280.........290.........300......... 310.........320.........330
Predicted Secondary structure  .....

















...........







Query SS confidence  . . . . .










































. . . . . . . . . . .




















Query Sequence  . . . . . IDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTR. . . . . . . . . . . ETLGSYEKKAFFDSNNDDMLV
Query Conservation  .....       

  
 

  
 

  





 
 


 

     ...........
 
     
 
    
   
 
Alig confidence  .....










































...........




















Template Conservation      
   
   

  





 


 
   
    


  
   
     
       
         
       
  
Template Sequence  DFQXRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAV
Template Known Secondary structure 
TT
SS

TT

TTS
GGGG
BTTTBSSTT

S
SS
Template Predicted Secondary structure 






















Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   331.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  KLIIDF
Query Conservation    
   
Alig confidence 





Template Conservation 
 
   
Template Sequence  QIIEQI
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   165....170
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions