Job Description P37751 Confidence 97.11% Date Thu Jan 5 11:57:28 GMT 2012 Rank 59 Aligned Residues 330 % Identity 9% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	F	T	T	G	G	P	F	T	I	L	K	K	F	L	A	A	T	N	N	K	E	N	V	S	F	I	A	L	V	H	S	A	K	E	L	K	E	S	Y	P	W	V	K	F	I	E	F	P	E	V	K	G	S	W	L	K	R	L	H	F	E	Y	V	V	C	K	K	L	S	K	E	L	N	A	T	H	W	I
Query Conservation
Alig confidence																																																										.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		L	E	H	F	H	S	A	H	S	I	Y	R	T	H	S	T	S	M	I	A	A	R	E	H	F	Y	L	I	G	L	G	S	P	S	V	D	Q	A	G	Q	E	V	F	D	E	F	H	L	V	A	G	D	N	M	K	Q	.	.	.	.	.	.	K	L	E	F	I	R	S	V	C	E	S	N	G	A	A	I	F	Y
Template Known Secondary structure			S	S			T	T	S													G	G	G	T									T	T	S						T	T	S	S								S	S				.	.	.	.	.	.													T		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.							.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	H	D	I	T	A	N	V	V	T	K	K	R	Y	V	Y	C	H	N	P	A	P	F	Y	K	G	I	L	F	R	E	I	L	M	E	P	S	F	F	L	F	K	M	L	Y	G	L	I	Y	K	I	N	I	K	K	N	T	A	V	F	V	Q	Q	F	W	M	K	E	K	F	I	K	K	Y	S	I	N	N	I
Query Conservation
Alig confidence																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		M	P	S	I	G	M	D	M	T	T	I	F	A	S	N	T	R	.	L	A	P	I	Q	A	I	A	L	G	H	P	A	T	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	I	E	Y	V	I	V	E	D	D	Y	V	G	S	.	.	.	E	E	C	F	S	E	T	L
Template Known Secondary structure			S			S	S	S							T	T	S		.		S	S							S	S		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								G	G	G		S		.	.	.	G	G	G		S	S
Template Predicted Secondary structure																			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.																				.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		I	V	S	R	P	E	I	K	L	S	D	K	S	Q	L	T	D	D	D	S	Q	F	K	N	N	P	S	E	L	T	I	F	Y	P	A	V	P	R	V	F	K	N	Y	E	L	I	I	S	A	A	R	K	L	K	E	Q	S	N	I	K	F	L	L	T	I	.	.	.	.	S	G	T	E	N	A	Y	A	K	Y	I
Query Conservation																																																																			.	.	.	.
Alig confidence																																																																			.	.	.	.
Template Conservation
Template Sequence		L	R	L	P	K	D	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N	G	I	T	H	P	Y	V	E	R
Template Known Secondary structure						T	T	S	S						T	T			S	S							S			S										S	T	T																	S	S										T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		I	S	L	A	E	G	L	D	N	V	H	F	L	G	Y	L	D	K	E	K	I	D	H	C	Y	N	I	S	D	I	V	C	F	P	S	R	L	E	T	W	G	L	P	L	S	E	A	K	E	R	G	K	W	V	L	A	S	D	F	P	F	T	R	E	T	L	G	S	.	.	.	.	.	.	Y	E	K	K	A	F
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																								.																														.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	G	.	N	T	N	G	I	I	D	M	V	T	L	G	L	V	G	V	C	K	T	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L	P	E	W	L
Template Known Secondary structure								G	G	G																		T		S						S	S	S		.		S									T	T									S	S													T	T			G	G	G
Template Predicted Secondary structure																																								.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.											.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	S	N	N	D	D	M	L	V	K	L	I	I	D	F	K	K	G	N	L	K	K	D	I	S	D	A	N	F	I	Y	R	N	.	.	.	.	.	.	.	.	.	.	E	N	V	L	V	G	F	D	E	L	V	N	F	I	T	E	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		I	A	.	N	T	V	D	E	Y	V	E	R	A	V	R	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N	A	F	L	K	E
Template Known Secondary structure				.	S	S																												S		T							S			T
Template Predicted Secondary structure				.
Template SS confidence
		560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions