Job Description P37751 Confidence 99.78% Date Thu Jan 5 11:57:28 GMT 2012 Rank 35 Aligned Residues 345 % Identity 10% Template c3iaaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	V	V	V	S	A	V	N	F	T	T	G	G	P	F	T	I	L	K	K	F	L	A	A	T	N	N	K	E	N	V	S	F	I	A	L	V	H	S	A	K	E	L	K	E	S	Y	P	W	V	K	F	I	E	F	P	E	V	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																								.
Template Sequence		H	L	L	I	V	.	.	.	N	V	A	S	H	G	L	I	L	P	T	L	T	V	V	T	E	L	V	R	R	G	H	.	R	V	S	Y	V	T	A	G	G	F	A	E	P	V	R	A	A	G	A	T	V	V	P	Y	Q	S	E	I	I	D	A	D	A	A	E	V	F	G	S	D	D	L	G	V	R	P	H	L
Template Known Secondary structure							.	.	.			S																		T	T		.								G	G	G							T	T									S	G	G	G							T	T	S		S	S
Template Predicted Secondary structure							.	.	.																								.
Template SS confidence
		3	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
			66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																																										.	.	.	.	.	.
Query SS confidence		.																																																																										.	.	.	.	.	.
Query Sequence		.	W	L	K	R	L	H	F	E	Y	V	V	C	K	K	L	S	K	E	L	N	A	T	H	W	I	C	L	H	D	I	T	A	N	V	V	T	K	K	R	Y	V	Y	C	H	N	P	A	P	F	Y	K	G	I	L	F	R	E	I	L	M	E	P	S	F	F	L	F	K	M	L	Y	G	L	.	.	.	.	.	.
Query Conservation		.																																																																										.	.	.	.	.	.
Alig confidence		.																																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		X	Y	L	R	E	N	V	S	V	L	R	A	T	A	E	A	L	D	G	D	V	P	D	L	V	L	Y	D	D	F	P	F	I	A	G	Q	L	L	A	A	R	W	R	R	P	A	V	R	L	S	A	A	F	A	S	N	E	H	Y	S	F	S	Q	D	X	V	T	L	A	G	T	I	D	P	L	D	L	P	V	F
Template Known Secondary structure																			S	S	S			S						S	T	T												T								S	S					S	S			T	T								T				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	K	I	N	I	K	K	N	T	A	V	F	V	Q	Q	F	W	M	K	E	K	F	I	K	K	Y	S	I	N	N	I	I	V	S	R	P	E	I	K	L	S	D	K	S	Q	L	T	D	D	D	S	Q	F	K	N	N	P	S	E	L	T	I	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		R	D	T	L	R	D	L	L	A	E	H	G	L	S	R	S	V	V	D	C	W	N	H	V	E	Q	L	N	L	V	F	V	P	K	A	F	Q	I	A	G	D	T	F	D	D	R	F	V	F	V	G	P	C	F	D	.	.	.	.	.	.	D	R	R	F	L	G	E	W	T	R	P	A	D	D	L	P	V	V	L
Template Known Secondary structure												T	T		S								T				S					S	S		T	T	T	S	T	T	G	G	G			T	T										.	.	.	.	.	.			G	G	G							S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	A	V	P	R	V	F	K	N	Y	E	L	I	I	S	A	A	R	K	L	K	E	Q	S	N	I	K	F	L	L	T	I	S	G	T	E	N	A	Y	A	K	Y	I	I	S	L	A	E	G	L	D	N	V	H	F	L	G	Y	L	D	K	E	K	I	D	H	C	Y	N	I	S	D	I	V	C	F	P	S	R
Query Conservation
Alig confidence																																													.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		V	S	L	G	T	T	F	N	D	R	P	G	F	F	R	D	C	A	R	A	F	D	G	Q	P	W	H	V	V	X	T	L	G	G	Q	V	D	P	A	A	L	G	D	.	.	.	.	.	.	L	P	P	N	V	E	A	H	R	W	V	P	H	V	K	V	.	.	.	.	.	.	.	L	E	Q	A	T	V	C	V
Template Known Secondary structure						S	S	S														T	T	T	S	S								T	T	S	S		G	G	G	G			.	.	.	.	.	.			T	T					S								.	.	.	.	.	.	.			T		S
Template Predicted Secondary structure																																													.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																			.	.															.
Query SS confidence																											.	.	.	.																			.	.															.
Query Sequence		L	E	T	W	G	L	P	L	S	E	A	K	E	R	G	K	W	V	L	A	S	D	F	P	F	.	.	.	.	T	R	E	T	L	G	S	Y	E	K	K	A	F	F	D	S	N	N	.	.	D	D	M	L	V	K	L	I	I	D	F	K	K	G	.	N	L	K	K	D	I	S	D	A	N	F	I	Y	R	N	E
Query Conservation																											.	.	.	.																			.	.															.
Alig confidence																											.	.	.	.																			.	.															.
Template Conservation
Template Sequence		T	H	G	G	X	G	T	L	X	E	A	L	Y	W	G	R	P	L	V	V	V	P	Q	S	F	D	V	Q	P	X	A	R	R	V	D	Q	L	G	L	G	A	V	L	P	G	E	K	A	D	G	D	T	L	L	A	A	V	G	A	V	A	A	D	P	A	L	L	A	R	V	E	A	X	R	G	H	V	R	R	A
Template Known Secondary structure			S												T	T									S	G	G	G										T	T	S						G	G	G															T																		S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	V	G	F	D	E	L	V	N	F	I	T	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	A	A	R	A	A	D	A	V	E	A	Y	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions