Job Description P37751 Confidence 98.68% Date Thu Jan 5 11:57:28 GMT 2012 Rank 44 Aligned Residues 256 % Identity 11% Template c3hbmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	S	I	V	V	V	S	A	V	N	F	T	T	G	G	P	F	T	I	L	K	K	F	L	A	A	T	N	N	K	E	N	V	S	F	I	A	L	V	H	S	A	K	E	L	K	E	S	Y	P	W	V	K	F	I	E	F	P	E	V	K	G	S	W	L	K	R	L	H	F	E	Y	V	V	C	K	K	L	S
Query Conservation
Alig confidence																														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	V	L	F	R	S	D	S	S	S	Q	I	G	F	G	H	I	K	R	D	L	V	L	A	K	Q	Y	.	.	.	.	.	S	D	V	S	F	A	C	L	P	L	E	G	S	L	I	D	E	I	P	Y	P	V	Y	E	L	S	S	E	S	.	.	.	.	.	.	.	.	.	.	I	Y	E	L	I	N	L	I
Template Known Secondary structure											B	T	T	T	B	S											T	T		.	.	.	.	.	S	S									T	T			G	G	G			S						S	S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	N	A	T	H	W	I	C	L	H	D	I	T	A	N	V	V	T	K	K	R	Y	V	Y	C	H	N	P	A	P	F	Y	K	G	I	L	F	R	E	I	L	M	E	P	S	F	F	L	F	K	M	L	Y	G	L	I	Y	K	I	N	I	K	K	N	T	A	V	F	V	Q	Q	F	W	M	K	E	K	F
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	E	K	F	E	L	L	I	I	D	H	Y	G	I	S	V	D	D	E	K	L	I	K	L	E	T	G	V	K	I	L	S	F	D	D	E	I	K	P	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	I	L	L	N	V	N	A	Y	A	K	A	S	D
Template Known Secondary structure					T		S							T	T																						S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	T	T			G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	K	Y	S	I	N	N	I	I	V	S	R	P	E	I	K	L	S	D	K	S	Q	L	T	D	D	D	S	Q	F	K	N	N	P	S	E	L	T	I	F	Y	P	A	V	P	R	V	F	K	N	Y	E	L	I	I	S	A	A	R	K	L	K	E	Q	S	N	I	K	F	L	L	T	I	S	G	T	E	N	A
Query Conservation
Alig confidence																			.	.																																														.	.	.	.	.	.
Template Conservation																			.	.																																														.	.	.	.	.	.
Template Sequence		Y	E	G	L	V	P	K	C	E	V	R	C	G	F	S	Y	A	.	.	L	I	R	E	E	F	Y	Q	E	A	K	E	N	R	K	K	K	Y	D	F	F	I	C	X	G	G	T	D	I	K	N	L	S	L	Q	I	A	S	E	L	P	K	T	K	I	.	.	.	.	.	.	I	S	I	A	T	S	S	S	N	P
Template Known Secondary structure		G	T	T	T									S	G	G	G		.	.										T	T															S			T	T										S		T	T	S		.	.	.	.	.	.							T	T		T
Template Predicted Secondary structure																			.	.																																														.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	K	Y	I	I	S	L	A	E	G	L	D	N	V	H	F	L	G	Y	L	D	K	E	K	I	D	H	C	Y	N	I	S	D	I	V	C	F	P	S	R	L	E	T	W	G	L	P	L	S	E	A	K	E	R	G	K	W	V	L	A	S	D	F	P	F	T	R	E
Query Conservation
Alig confidence																								.	.																	.	.	.	.	.
Template Conservation																								.	.																	.	.	.	.	.
Template Sequence		N	L	K	K	L	Q	K	F	A	K	L	H	N	N	I	R	L	F	I	D	H	E	.	.	N	I	A	K	L	X	N	E	S	N	K	L	I	I	S	A	.	.	.	.	.	S	S	L	V	N	E	A	L	L	L	K	A	N	F	K	A	I	C	Y	V	K	N	Q	E
Template Known Secondary structure		T										T		S	S						S		S	.	.								T								S	.	.	.	.	.	S									T	T									S	G	G	G
Template Predicted Secondary structure																								.	.																	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions