Job Description P37751 Confidence 40.36% Date Thu Jan 5 11:57:28 GMT 2012 Rank 75 Aligned Residues 89 % Identity 12% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																															.	.
Query SS confidence																.	.																															.	.
Query Sequence		Y	E	L	I	I	S	A	A	R	K	L	K	E	Q	.	.	S	N	I	K	F	L	L	T	I	S	G	T	E	N	A	Y	A	K	Y	I	I	S	L	A	E	G	L	D	N	V	.	.	H	F	L	G	Y	L	D	K	E	K	I	D	H	C	Y	N	I	S	D	I	V	C	F	P	S	R	L	E	T	W	G	L
Query Conservation																.	.																															.	.
Alig confidence																.	.																															.	.																																.
Template Conservation																																																																																	.
Template Sequence		W	Q	K	I	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	R	I	Y	G	Q	R	A	A	I	K	F	A	G	Y	T	H	C	K	S	T	S	S	S	R	W	T	P	G	T	L	T	N	Y	Q	T	L	K	Y	E	E	P	R	V	L	I	V	T	D	P	R	S	D	F	Q	.
Template Known Secondary structure																S	S	G	G	G							S															T		B					S	S			T	T	T	T	T		T	T		S	S					S					S		T	T	T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	E	A	K	E	R	G	K	W	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	E	A	S	Y	V	N	I	P	V	I	A
Template Known Secondary structure							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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