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Job DescriptionP37751
Confidence100.00%DateThu Jan 5 11:57:28 GMT 2012
Rank8Aligned Residues364
% Identity14%Templatec2qzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10... ......20.........30.........40.........50.........60....
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Query Sequence  SIVVVSAVNF. . . TTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKG. . . . . . . . . . . . . . . .
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Template Sequence  QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYL
Template Known Secondary structure 
S
BTTTB
SSTT



TT


TT

TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   65....70.........80.........90.........100.........110.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . SWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKG
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Template Sequence  IDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVH
Template Known Secondary structure 


SS
SSB
TTS
B
TTTTTSSTT


STGGGTTTT
SSS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   118.120.........130......... 140.........150.........160...... ...170
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Query Sequence  ILFREILMEPSFFLFKMLYGLI. . . . . . . . . . . . . . YKINIKKNTAVFVQQFWMKEKFIKKYS. . . . . . . . . . . . . INNI
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Template Sequence  NLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRL
Template Known Secondary structure 
TT


GGGGGTTT

GGG
STTTTTT
SSSTTSTT
TT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   171........180.........190. ........200.........210.........220.......
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Query Sequence  IVSRPEIKLSDKSQLTDDDSQ. . . . . . . . . . . . . . . . . . . . . . . FKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQS
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Template Conservation    
    
                                    
        
   
          
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Template Sequence  SGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGL. LEQ
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TTTS
TTT
TTSSS


TT
GGGGT



TTS
SGGG
.T
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   242.......250.........260.........270.........280.........290.........300.........310....... ..320
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  NIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPF
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Template Sequence  GGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGG
Template Known Secondary structure  T

STTTS


S

S

SS
ST
SS
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   308.310..... ....320.........330........ .340.........350. ........360........
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Query Sequence  TRETLGSY. . . . . . . . . EKKAFFDSNNDDMLVKLIIDFKK. . . GNLKKDISDANFI. . . YRNENVLVGFDELVNFI
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Template Conservation    
 
  
           
 

   
   

 

   
                    


   
     

  
Template Sequence  LADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRL
Template Known Secondary structure 

B

TT


B
SSSTS



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   401........410.........420.........430.........440.........450.........460.........470......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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