Job Description P75938 Confidence 99.94% Date Thu Jan 5 12:16:12 GMT 2012 Rank 2 Aligned Residues 130 % Identity 28% Template d1wlga_ SCOP info Flagellar hook protein flgE Flagellar hook protein flgE Flagellar hook protein flgE Resolution 1.80

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	V	A	L	Q	Q	D	G	W	L	A	V	Q	T	A	D	G	S	E	G	Y	T	R	N	G	S	I	Q	V	D	P	T	G	Q	L	T	I	.	Q	G	H	P	V	I	G	E	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	V	A	I	S	Q	N	G	F	F	R	L	V	D	S	N	G	S	V	F	Y	S	R	N	G	Q	F	K	L	D	E	N	R	N	L	V	N	M	Q	G	M	Q	L	T	G	Y	P	A	T	G	T	P	P	T	I	Q	Q	G	A	N	P	A	P	I	T	I	P	N	T	L	M	A	A	K	S	T	T	T	A
Template Known Secondary structure							S	S	S								T	T							S								T	T	S					T	T										B	T	T	T	T	B			T	T													B			B
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	Q	I	N	L	N	S	T	D	P	V	P	S	K	T	P	F	S	V	S	D	A	D	S	Y	N	K	K	G	T	V	T	V	Y	D	S	Q	G	N	A	H	D	M	N	V	Y	F	V	K	T	K	D	N	E	W	A	V	Y	T	H	D	S	S	D	P	A	A	T	A	P	T	T	A	S	T	T	L	K	F
Template Known Secondary structure									T	T					S	S		S			T	T		T	T	S		S										T	T															T	T									T	T		T	T						S		S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
																																																				126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	A	V	P	E	G	A	E	I	T	I	A	A	D	G	T	I	S	A	L	N	P	G	D	P	A	N	T	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	N	G	I	L	E	S	G	G	T	V	N	I	T	T	G	T	I	N	G	A	T	A	A	T	F	S	L	S	F	L	N	S	M	Q	Q	N	T	G	A	N	N	I	V	A	T	N	Q	N	G	Y	K	P	G	D	L	V	S	Y	Q	I	N	N	D	G	T	V	V	G	N	Y	S	N	E	Q	E	Q	V	L
Template Known Secondary structure			T	T	S	B														B	T	T	B										T	T					S	S													B			B									T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	V	G	R	L	K	L	V	K	A	T	G	S	E	V	Q	R	G	D	D	G	I	F	R	L	S	A	E	T	Q	A	T	R	G	P	V	L	Q	A	D	P	T	L	R	V	M	S	G	V	L	E	G	S
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		G	Q	I	V	L	A	N	F	A	N	N	E	G	L	A	.	.	S	Q	G	D	N	V	W	A	A	T	Q	A	S	G	V	A	L	L	G	T	A	G	S	G	N	F	G	K	L	T	N	G	A	L	E	A	S
Template Known Secondary structure										S		G	G	G	S		.	.			S	T	T						T	T	T								T	T	B	T	T	B				S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions