 |
Job Description | P75938 | Confidence | 3.12% | Date | Thu Jan 5 12:16:12 GMT 2012 |
Rank | 100 | Aligned Residues | 86 |
% Identity | 28% | Template | c3pfnB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:nad kinase; |
PDBTitle: crystal structure of human nad kinase
|
Resolution | 2.70 Å |
|
 |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
L | D | V | A | L | Q | Q | D | G | W | L | A | V | Q | T | A | D | G | S | E | G | Y | T | R | N | G | S | I | Q | V | D | P | T | G | Q | L | T | I | Q | G | H | P | V | I | G | E | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | I | A | V | P | E | G | A | E | I | T | I | . |
. |
. |
. |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   | . |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |
Template Sequence |   |
V | D | V | Y | L | D | G | H | L | I | T | T | V | Q | . |
G | D | G | V | I | V | S | T | P | T | G | S | . |
. |
. |
. |
. |
T | A | Y | A | A | A | A | G | A | S | X | I | H | P | N | V | P | A | I | X | I | T | P | I | C | P | H | S | L | S | F | R | P | I | V | V | P | A | G | V | E | L | K | I | X | L | S | P |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |
| . |  |  |  |  |  |  |  |
| G | G | G | G | . | . | . | . | . | G | T |  |  |  |  | T | T |
|
|
|
|
| T | T | S |
|
|  |  |  |  |  |  |  |  | S | S | T | T |
|
|
|  |  |  |
| T | T |
|
|  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
. | . | . | . | . | . | . | 320 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
  |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | D | G | T | I | S | A | L | N | P | G | D | P | A | N | T | V | A | P | V | G | R | L | K | L | V | K | A | T | G | S |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |
Template Sequence |   |
E | A | R | N | T | A | W | V | S | F | D | G | R | K | R | Q | E | I | R | H | G | D | S | I | S | I | T | T | S | C | Y | P |
Template Known Secondary structure |   |
T |
| S | S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|