 |
Job Description | P18776 | Confidence | 98.70% | Date | Thu Jan 5 11:37:07 GMT 2012 |
Rank | 43 | Aligned Residues | 55 |
% Identity | 24% | Template | d1fxra_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Single 4Fe-4S cluster ferredoxin
|
Resolution | 2.30 |
|
 |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | V | V | V | D | E | D | V | C | I | G | C | R | Y | C | H | M | A | C | P | Y | G | A | P | Q | Y | N | E | T | K | G | H | M | . |
. |
. |
. |
. |
. |
. |
T | K | C | D | G | C | Y | D | R | V | A | E | G | K | K | P | I | C | V | E | S | C | P | L | R | A | L | D | F | G | P |
Query Conservation |   |
|   |
|   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |   |
|
| . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |
|
|   |   |   |
|
Template Sequence |   |
R | K | F | Y | V | D | Q | D | E | C | I | A | C | E | S | C | V | E | I | A | P | . |
G | A | F | A | M | D | P | E | I | E | K | A | Y | V | K | D | V | E | G | A | S | Q | E | E | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | A | M | D | T | C | P | V | Q | C | I | H | W | E | D |
Template Known Secondary structure |   |
|  |  |  |  |
| T | T | T |
|
|
|
|
|  |  |  |  |  |
| T | . | T | T |  |  |  |  | T | T | T | T |  |  |  |  | S |
| T | T | S | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T |
|
|  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|