Job Description P18776 Confidence 100.00% Date Thu Jan 5 11:37:07 GMT 2012 Rank 5 Aligned Residues 202 % Identity 31% Template c1kqfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		M	T	T	Q	Y	G	F	F	I	D	S	S	R	C	T	G	C	K	T	C	E	L	A	C	K	D	Y	K	D	L	T	P	E	V	S	F	R	R	I	Y	E	Y	A	G	G	D	W	Q	E	D	.	.	.	.	.	.	.	.	N	G	V	W	H	Q	N	V	F	A	Y	Y	L	S	I	S	C	N	H	C	E	D
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	A	E	V	A	K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R	F	S	E	T	E	Q	N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D
Template Known Secondary structure												T	T	T																T									S	S	S	S			S	S	S		B	T	T	B	S										T	T	S	S									S				B	S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	A	C	T	K	V	C	P	S	G	.	A	M	H	K	R	E	D	G	F	V	V	V	D	E	D	V	C	I	G	C	R	Y	C	H	M	A	C	P	Y	G	A	P	Q	Y	N	E	T	K	G	H	M	T	K	C	D	G	C	Y	D	R	V	A	E	G	K	K	P	I	C	V	E	S	C	P	L	R	A	L	D
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		P	G	C	L	K	A	C	P	S	A	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	N	C	I	G	C	G	Y	C	I	A	G	C	P	F	N	I	P	R	L	N	K	E	D	N	R	V	Y	K	C	T	L	C	V	D	R	V	S	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H
Template Known Secondary structure										S	T	T	S					T	T	S						G	G	G												T	T							T	T	T	T							T	T					T	T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	P	I	D	E	L	R	K	K	H	G	D	L	A	A	V	A	P	L	P	R	A	H	F	T	K	P	N	I	V	I	K	P	N	A	N	S	R	P	T	G	D	T	T	G	Y	L	A	N	P	K	E	V
Query Conservation
Alig confidence																		.	.													.
Template Conservation																		.	.													.
Template Sequence		F	G	T	K	K	E	M	L	E	L	A	E	Q	R	V	A	.	.	K	L	K	A	R	G	Y	E	H	A	G	V	.	Y	N	P	E	G	V	G	G	T	H	V	M	Y	V	L	H	H	A	D	Q	P	E	L
Template Known Secondary structure																		.	.					T	T		T	T				.				G	G	G	T		B	S						T	T	T	T		G	G	G
Template Predicted Secondary structure																		.	.													.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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