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Job DescriptionP0A9I8
Confidence99.96%DateThu Jan 5 11:10:25 GMT 2012
Rank4Aligned Residues99
% Identity18%Templatec2qpzA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLS
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Template Sequence  VK. WIEAVALSDILEGDVLGVTVEGKELALYEV. . EGEIYATDNLCTHGSA. RMSDGYLE. . . . GREIECPLHQGRFDVC
Template Known Secondary structure 

.TTS

TT
TT..TTSB
SSSS
.BGGGS....TT
TTTT
TT
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   2. ......10.........20.........30... ......40......... 50....... ..60.........70...
 
   81........ 90.........100.......
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Query Sequence  DGLCMEDEQ. FSVKHYEARVKDGVVQLR
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Template Sequence  TGKALCAPVTQNIKTYPVKIENLRVMID
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TT
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   74.....80.........90.........100.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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