Return to main results Retrieve Phyre Job Id

Job DescriptionP17952
Confidence100.00%DateThu Jan 5 11:36:25 GMT 2012
Rank17Aligned Residues215
% Identity69%Templated1p3da3
SCOP infoRibokinase-like MurD-like peptide ligases, catalytic domain MurCDEF
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  RAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQP
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Template Sequence  RAQXLAEIXRFRHGIAVAGTHGKTTTTAXISXIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQP
Template Known Secondary structure 
TSSSS
TT


TTTT

SSS


TTSGGGG


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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  MVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIG
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Template Sequence  XVSVVTNXEPDHXDTYEGDFEKXKATYVKFLHNLPFYGLAVXCADDPVLXELVPKVGRQVITYGFSEQADYRIEDYEQTG
Template Known Secondary structure  S





SGGGGTT
TTS
TT
TT

SSSTT
ST
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   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   268.270.........280.........290.........300.........310.........320..
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Query Sequence  PQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQ
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Template Sequence  FQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQ
Template Known Secondary structure  T
TT

SS
STT

T

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   267..270.........280.........290.........300.........310.........320.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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