|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | H | I | H | F | V | G | I | G | G | A | G | M | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | M | N | L | G | A | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | Y | F | N | H | R | P | E | N | V | R | D | A | S | V | V | V | V | S |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|   |
|   |
|
|   | . |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
Template Sequence |   |
L | N | K | A | V | V | F | G | S | G | A | F | G | T | . |
A | L | A | M | V | L | S | K | K | C | R | E | V | C | V | W | H | M | N | E | . |
E | E | V | R | L | V | N | E | K | R | E | N | V | L | F | L | K | G | V | Q | L | A | S | N | I | T | F | T | S | D | V | E | K | A | Y | N | G | A | E | I | I | L | F | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| S |  |  |  |  | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S |
|  | . |  |  |  |  |  |  |  |  |  | T | B |
| T | T | T | S | T | T |
| B |
|
| T | T |  |  |  |  | S |
|  |  |  |  |  | T | T |
| S |
|  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
S | A | I | S | A | D | N | P | E | I | V | A | A | H | . |
. |
. |
. |
. |
. |
. |
. |
E | A | R | I | P | V | I | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | A | E | M | L | A | E | L | M | R | F | R | H | G | I | A | I | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | H |
Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |
|   | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | P | T | Q | F | L | R | G | F | F | E | K | S | G | G | N | L | I | A | Y | A | K | E | K | Q | V | P | V | L | V | C | T | K | G | I | E | R | S | T | L | K | F | P | A | E | I | I | G | E | F | L | P | S | P | L | L | S | V | L | A | G | P | S | F | A | I | E | V | A | T | G | V | F | T | C | V | S | I | A | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
|
| S |
|
| T | T | T |
|
|
|  |  |  |  |  | T | T | T | S |
| G | G | G |  |  |  |  |  | S | S |
|
|  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | T | T | T | T | A | M | V | S | S | I | Y | A | E | A | G | L | D | P | T | F | V | N | G |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
A | D | I | N | V | A | R | R | L | Q | R | I | M | S | T | G | D | R | S | F | V | C | W | A | T |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | S | S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
  |