 |
Job Description | P17952 | Confidence | 97.41% | Date | Thu Jan 5 11:36:25 GMT 2012 |
Rank | 70 | Aligned Residues | 115 |
% Identity | 21% | Template | d1mv8a2 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| 6-phosphogluconate dehydrogenase-like, N-terminal domain
|
Resolution | 1.55 |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | H | F | V | G | I | G | G | A | G | M | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | T | Q | Q | L | M | N | L | G | A | T | I | Y | F | N | H | R | P | E | N | V | R | D | A | S | V | V |
Query Conservation |   |
  |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|   |   |
|   | . |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
R | I | S | I | F | G | L | G | Y | V | G | A | . |
V | C | A | G | C | L | S | A | R | G | H | E | V | I | G | V | D | V | S | S | T | K | I | D | L | I | N | Q | G | K | S | P | I | V | E | P | G | L | E | A | L | L | Q | Q | G | R | Q | T | G | R | L | S | G | T | T | D | F | K | K | A | V | L | D | S | D | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | T | T |  |  | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | S |
|  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
83 | . | . | . | . | |
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | S | S | A | . |
. |
. |
. |
. |
. |
I | S | A | D | N | P | E | I | V | A | A | H | E | A | R | I | P | V | I | R | R | A | E | M | L | A | E | L | M | R | F | R | H | G | I | A | I | A | G | T | H | G | K | T | T | T | T | A | M | V | S | S | I | Y | A | E |
Query Conservation |   |
|   |
|
|
| . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
F | I | C | V | G | T | P | S | K | K | N | G | D | L | D | L | G | Y | I | E | T | V | C | R | E | . |
. |
. |
. |
. |
. |
. |
I | G | F | A | I | R | E | K | S | E | R | H | T | V | V | V | R | S | T | V | L | P | G | T | V | N | N | V | V | I | P | L | I | E | D |
Template Known Secondary structure |   |
 |  |
|
|
|
|
| B |
| T | T | S | S | B |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  | T | T |
|
| S |
|
|  |  |  |  |
| S |
|
|
| T | T |  |  |  |  | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|