Job Description P17952 Confidence 100.00% Date Thu Jan 5 11:36:25 GMT 2012 Rank 18 Aligned Residues 202 % Identity 26% Template d1j6ua3 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain MurCDEF Resolution 2.30

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		111	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	L	A	E	L	M	R	.	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G	G	L	V	K	A	A	G	V	H	A	R	L	G	H	G	R	Y	L	I	A	E	A	D	E	S	D	A	S	F	L	H	L	Q	P	M	V
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		F	R	D	T	L	K	R	E	K	K	E	E	F	A	V	T	G	T	D	G	K	T	T	T	T	A	X	V	A	H	V	L	K	H	L	R	K	S	P	T	V	F	L	G	G	I	X	D	S	L	E	H	G	N	Y	E	K	G	N	G	P	V	V	Y	E	L	D	E	S	E	E	F	F	S	E	F	S	P	N	Y
Template Known Secondary structure																			S	S	S															T	T								S	S			T	T	S	T	T	S	S					S	S								T	T	S	G	G	G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	T	N	I	E	A	D	H	M	D	T	Y	Q	G	D	F	E	N	L	K	Q	T	F	I	N	F	L	H	N	L	P	F	Y	G	R	A	V	M	C	V	D	D	P	V	I	R	E	L	L	P	R	V	G	R	Q	T	T	T	Y	G	F	S	E	D	A	D	V	R	V	E	D	Y	Q	Q	I	G	P	Q
Query Conservation
Alig confidence																																			.	.	.																						.	.	.	.	.	.	.
Template Conservation																																			.	.	.																						.	.	.	.	.	.	.
Template Sequence		L	I	I	T	N	A	R	G	D	H	L	E	N	Y	G	N	S	L	T	R	Y	R	S	A	F	E	K	I	S	R	N	T	D	.	.	.	L	V	V	T	F	A	E	D	E	L	T	S	H	L	G	D	V	T	F	G	V	.	.	.	.	.	.	.	K	K	G	T	Y	T	L	E	X	R	S	A	S	R	A	E
Template Known Secondary structure												G	G	G	G	T	T															T		S	.	.	.						T	T		T	T	T	G	G	G		S					S	.	.	.	.	.	.	.	S	S	S	S										S	S
Template Predicted Secondary structure																																			.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	F	T	L	L	R	Q	D	K	E	P	M	R	V	T	L	N	A	P	G	R	H	N	A	L	N	A	A	A	A	V	A	V	A	T	E	E	G	I	D	D	E	A	I	L	R	A	L	E	S	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	A	X	V	E	K	N	G	K	R	Y	L	E	L	K	L	K	V	P	G	F	H	N	V	L	N	A	L	A	V	I	A	L	F	D	S	L	G	Y	D	L	A	P	V	L	E	A	L	E	E	F	R
Template Known Secondary structure									T	T									S	S		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions