 |
Job Description | P17952 | Confidence | 94.02% | Date | Thu Jan 5 11:36:25 GMT 2012 |
Rank | 489 | Aligned Residues | 84 |
% Identity | 17% | Template | d1euca1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| CoA-binding domain
|
Resolution | 2.10 |
|
 |
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | R | V | R | H | I | H | F | V | G | I | . |
G | G | A | G | M | G | G | I | A | E | V | L | A | N | E | G | Y | Q | . |
I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | M | N | L | G | A | T | I | Y | F | N | H | R | P | E | N | V | . |
. |
. |
R | D | A | S | V | V | V | V | S | S | A | I | S | A |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |
|
|   | . |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |
|
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |
| . |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |   | . | . | . | . |   |   |   |
|
|   |   |
| . | . |   |
|   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |
Template Sequence |   |
V | D | K | N | T | K | V | I | C | Q | G | F | T | G | K | Q | G | T | F | H | . |
S | Q | Q | A | L | E | Y | G | T | N | L | V | G | G | T | T | P | G | K | G | G | K | . |
. |
. |
. |
T | H | L | G | L | P | V | F | . |
. |
N | T | V | K | E | A | K | E | Q | T | G | A | T | A | S | V | I | Y | V | P | P | P | F |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  | . |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| T | T |
| T | T |
| . | . | . | . |  |  | T | T |  |  |  |  | . | . | S | S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |  |  |
|
|
|
|
|
| . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | P | E | I | V | A | A | H | E | A | R | I | P | V | I |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
Template Sequence |   |
A | A | A | A | I | N | E | A | I | D | A | E | V | P | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|